Template-based Modeling Results for PPPA_ECOLI


  Submitted Primary Sequence

>Length 269
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
21120021110000000000000000000000110120022100212232222324100001202012032202022000000000120202104230111000000000000000001111101000000000000000000012120110000000000000001121211010000000000000000100000013230001000000000000000000000000000000000002332322001000000000000013223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF
1PROSPECT23a0oA30.0700.9521.531threading_1GWAEFYEKWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWD--------TKGATSRAYNDEAGFRVVVALAWGYD-----WLYDHLSERRTVRSVLLERTREVADHVIAPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYLNFDDLVYRHDY
2HHPRED-l3s0x_A0.1970.4912.478threading_2--------------------------------------------------------------------------------------------------------------------------SGS-IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFINGFF-VFLLILNGAENPQIPLIIPITLSYLVTPIIGDR-
3HHPRED-g3s0x_A0.1940.4983.851threading_3--------------------------------------------------------------------------------------------------------------------------SGS-IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGVFINGIFF-VFLPFVILILEQKNETQIPLIIPITLSYLVTPIIGDRI
4PROSPECT21ezfa0.0560.9221.454threading_4NSLKTCYKYGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPD------WRFMESKEKDRQVLEDFPTISLEFR--------NLAEKYQTVIADICRRMGIGMAEFLDKHVDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHH-------IPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNGAVKIDATNMPAVKAIIYQYMEEIY
5PROSPECT22bkuB20.0950.9741.376threading_5LTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYTFSPYLLKALN-------QVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYTSRAAVGLIGDIAAMFPDGSIKYGQDWVIDYIKRTRSGQLF
6PROSPECT23hfwA0.0960.9331.374threading_6MIHRQLAQLGGLVMHLATAEALVLTQLYYLLAKHYQDCMEDASVHNAMQLKPGKPNGWRIPFNSHEGGCGA----AMRAMCIGLRFPH--------------HSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLRDQFYTSLSYSGWGGSSGHDAPMIAYDAVLSWKELAHRASTAAIAGCWWGVMYGFKGEKLEYRNRLETARALYSLGSKSL
7PROSPECT23g9dA0.1130.9181.355threading_7SIRS---------RALGAYLGLACGDALGATVEFLTKGEIAHQ--------YGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAILAAPEWVWLKGVPVDVGDTTRRGIRRFIMHGTLSEPESEYHAMRNLPVALAFERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIAIVDTMQTVMHYYFQTD-----SVESCVVETVNQGGDADTTGAIAGMLAGATYGVETIPPRRKLDRDVYNEICAQVDGLLARAL
8MUSTER3zuxA0.1400.9030.823threading_8IISSFIGKTFSLWAALFAAAAFFAGPYIPWLLG-FGMGLTLKP-SDFDILFKHPKVVIIGV-----------IAQFAIMPATAWCLSKGCCARGNVALSVAVTSVSTLTSPLLTPAIFLMLAQAAGMLMSIVKMVLLPIVLGLIVHKVLGSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLP------YDAQKALTIEVGMQNSGLAAALAAAHF-------AAPVVAVPGALFSVWHNISGSLLATYW
9SPARKS2xwub0.1530.9220.988threading_9GLIGLIPRISISNVQLADTVMFTIGALSEWLA-DHPVMINSVLPLVLHALGNPELSVSSVSTKKICRECKYDLPAANIVAVSQDVLMKQ--------IHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPN--PSNKLAIVHILGLLSNLFTTLDISHPN------PVVVVLQQVFQLIQKVLSKWL---NDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTI-PQASALDLTRQLVHIFAHEP
10PROSPECT21jdha0.0790.9851.341threading_10AIVRTMQNVDSVLFYAITTLHNLLLHLVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKLHLTDPSQSDAATKQEGMEGLLGTLVQLLGSDDINLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN----IQRVAAGVLCELAQDKEA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.435 to 1h2sB
SCOP code=f.17.4.1
TM-score=0.619 to 1hzfA
SCOP code=a.102.4.4
TM-score=0.421 to 1nlxN
SCOP code=a.24.17.1
TM-score=0.418 to 1nlxN
SCOP code=a.24.17.1
TM-score=0.737 to 1t5jA
SCOP code=a.209.1.1