Template-based Modeling Results for RAPA_ECOLI

Submitted Primary Sequence

>Length 968
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
CCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEHHHHHCCHHHHHHHHCCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
35122112111312110010000002111010000211221111223010000102212102113222020220323411000002123344211102212232312122221211213123222010112012101331322111122331201211020011003211110000121000200100000011122222320000001000320021013203120000133321101222222132210000001003313310320140301000001012022232210210200220132030000000002221120000002101132023022013213212211210121111231233113101310133103201310221133122112200110022211021012102200310122102203121221121002000112233213332211110220132121111212212310220011033342210000000010021012002332202000013202221022003202433220000000101120100100000000101110311110111013113232010000003321111002002200300221031132002201210131022332230022003202321321221133213201312221133021002102433232301100120021011323332320000112332113312202330010000131122233010011201002100110121321201000021421320000010000010202331302210231100000133123122303230024102213231013002102310330032022102400320032023201320211021021032213212331021022113301300330113030000002245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
1	MUSTER	3dmqA	0.972	0.969	4.990	threading_1	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQFR-PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGILHQQLLS-GAAERVLIIVPETLQHQWLVELRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG-ESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVALL-AGNKLSNDELNLGE--IGEQDIEPLLQAANSDSEDAQSARQELVSL--DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIGA-RKSAEDRARD-LYPERIYQEFEGDNATWWNFDPRVEWL-GYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD-TNLIAFANLFDIIGINQDDRGDN-IVLTPSDHL-VPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVE-SLDQAGWRLDALRL------
2	SPARKS	3dmqa	0.959	0.969	13.295	threading_2	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQF-RPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGILHQQ-LLSGAAERVLIIVPETLQHQWLVELRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG-ESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAV-ALLAGNKLSNDELN--LGEIGEQDIEPLLQAANSDSEDAQSARQELVS--LDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIGARKSA--EDRARDLYPERIYQEFEGDNATWWNFDPRVEWLGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGSI-IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF-ANLFDIIGINQDDRGDN-IVLTPSDHLV-PDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ-VESLDQAGWRLDALRL------
3	PROSPECT2	3dmqA	0.937	0.969	6.124	threading_3	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQ-FRPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGILHQQLL-SGAAERVLIIVPETLQHQWLVEL-RRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGE-SHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVA---LLAGNKLSNDELNLGEIGEQDIEPLLQAANSDSEDAQSARQELVS--LDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIGARKSAE--DRARDLYPERIYQEFEGDNATWWNFDPRVEWLGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIR-AAVFHEGSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA-NLFDIIGINQDDRGDNIVL--TPSDHLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQV-ESLDQAGWRLDALRL------
4	PPA-I	3dmqA	0.942	0.969	7.905	threading_4	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQF-RPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGILHQQLLS-GAAERVLIIVPETLQHQWLVELRR-FNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG-ESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVALLAGNKLSNDELN---LGEIGEQDIEPLLQAANSDSEDAQSARQELVSL--DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIGARKSAEDRARD--LYPERIYQEFEGDNATWWNFDPRVEWLGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDD-TNLIAFANLFDIIGINQDDRGDN-IVLTPSDHLV-PDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVE-SLDQAGWRLDALRL------
5	HHPRED-l	3dmq_A	0.999	0.967	3.048	threading_5	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQFR-PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAG-ILHQQLLSGAAERVLIIVPETLQHQWLVE-LRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG-ESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVA-LLAGNKLSNDELN-LGE-IGEQDIEPLLQAANSDSEDAQSARQELVS---DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI-GARKSAEDRARD-LYPERIYQEFEGDNATWWNFDPRVEWL-GYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH---FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA-NLFDIIGINQDDRGDN-IVLTPSDH-LVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQV-ESLDQAGWRLDALRL------
6	HHPRED-g	3dmq_A	0.999	0.967	1.046	threading_6	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQFR-PYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAG-ILHQQLLSGAAERVLIIVPETLQHQWLVE-LRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLG-ESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVA-LLAGNKLSNDELN-LGE-IGEQDIEPLLQAANSDSEDAQSARQELVS---DRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGI-GARKSAEDRARD-LYPERIYQEFEGDNATWWNFDPRVEWL-GYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASH---FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFA-NLFDIIGINQDDRGDN-IVLTPSDH-LVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQV-ESLDQAGWRLDALRL------
7	SP3	3dmqa	0.956	0.969	12.671	threading_7	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQ-QVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDR-DRFALRYRARKYSSEQF-RPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGILHQQ-LLSGAAERVLIIVPETLQHQWLVELRRFNL-RFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGE-SHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAV-ALLAGNKLSNDELNLG--EIGEQDIEPLLQAANSDSEDAQSARQELVS--LDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIGARKSAEDR--ARDLYPERIYQEFEGDNATWWNFDPRVEWLGYLTS-HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGSI-IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF-ANLFDIIGINQDDRGDN-IVLTPSDHLV-PDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQ-VESLDQAGWRLDALRL------
8	SAM-T99	3dmqA	0.923	0.939	8.517	threading_8	-PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRV-FNPGDTITSHDGWQQV-EEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRD-RFALRYRARKYSSEQF-RPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAG-ILHQQLLSGAAERVLIIVPETLQHQWLVEL-RRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGE-SHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVALLAGNKLSNDELNLGEIGEQDIEPLLQAANSDSEDAQSARQELVSLDRHG-----TSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQT----------------------YPERIYQEFEGDNATWWNFDPRVEWLG-YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEG-SIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHV--FDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAF-ANLFDIIGINQDDRGDNI--VLTPSDHLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVR-LLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVESLDQA----------------
9	MUSTER	1z3iX	0.166	0.630	1.950	threading_9	-----------------------------------------------------------------------------LGL---RKALHDFEDGALVLYEPP-------AISAHDLIKADKEKL--------------PVHVVVDPVLSK---VLRPHQREGVKFLWDCVSYGCIMADEMGLGKTLQCITLIWTLLKQSEIDKVIVVSPSSLVRNWYNEVGKWLGVQPVAIDGGSKDEIDSKLVNFIIPTPILIISYETFRLH---AEVLHKGKVGLVICDEGHRLKNSD---NQTYLALNSMN--AQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDA----DASDKDRAAGEQKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVC-CNLTPLQKELYKLFLKQAKPVESLKISVSSLSSITSLKKLCNHPALIYEK--CLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILAMTRSDKVVLVSNYTQTLDLFEKLCRNR-RYLYVRLDGTMSIKKRAKIVERFNNPSSPEIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFLGELRELFSLNEKTLS--------------------DTHDRFRCRRCVNGRQ-------VRPPPDDSDC--------------TCDLSNWHHCADKRG-LRDPVLQASWDAAVSFVF-HQRSHEDQR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	3mwyw	0.158	0.653	7.315	threading_10	ESH-LHNTWE--TYESIG-----QVRGKRLDNYCKQFIIEDQQVRLDPYVTAMDMERERRLDEFEEFH-VPERIEDGTSQLQYLVKWRRLNYDEAT-WENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPP-FIKGGELRDFQLTGINWMAFLWSKGGILADEMGLGKTVQTVAFISWLIFARQNGPHIIVVPLSTMPAWLDTFEKWAPLNCICYMGNQKSRDTIREYEFYTNFNVLLTTYEYILKD---RAELGSIKWQFMAVDEAHRLKNAESSLYESLNSF-----KVANRMLITGTPLQNNIKELAALVNFLMPGRFNQDEEQEEYIH----------------------------DLHRRIQPFILRRLKKDVEKSLPSKTERILR-VELSDVQTEYYKNILTKNYSF-------SLLNIMNELKKASNHPYLFDNAEERVLQK---------FMTRENVLRGLIMSSGKMVLLDQLLTRLKGHRVLIFSQMVRMLDILGDYLSIK-GINFQRLDGTVPSAQRRISIDHFNSPDSNDFFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYNEPN---------AGELSAILKFGAG-NMFTATDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLGEEFLKQFE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.506 to 1hv8A TM-score=0.998 to native SCOP code=c.37.1.19	TM-score=0.509 to 1hv8A TM-score=0.998 to native SCOP code=c.37.1.19	TM-score=0.507 to 1hv8A TM-score=0.998 to native SCOP code=c.37.1.19	TM-score=0.499 to 1hv8A TM-score=0.998 to native SCOP code=c.37.1.19	TM-score=0.498 to 1xtkA TM-score=0.998 to native SCOP code=c.37.1.19

Experimental Structure

Download 3dmqA

SCOP code=c.37.1.19