Template-based Modeling Results for RCNA_ECOLI


  Submitted Primary Sequence

>Length 274
MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR
CCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR
4531121122010000000000000000022110100000000113120220010000000010000000000000003301230022002100000000000000011022222223213012121211313121211221213223211101211020132112233121210000000001110120000000002032011000000010000000000000000000120143120021002101000000000000000020011125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR
1PROSPECT21xm9A0.0841.0001.356threading_1IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQRNLVFRSTTNKLETRAEIQKQLTGLLWNLLIADALPVLADRVIIPFSPEVFFNATGCLRLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVQVFPEVTRNSEDILSSACYTVRNLMMLNNIINLCR
2HHPRED-g3aqp_A0.0960.8761.024threading_2FERIKEELPEHNIAHLLAAAALYQY--ATG-----------------PV-RGFAVILAIGVVASFSNLVFSRHLERLADRGNFMGPARYVTAATLLLAALAAGVVFAKGFN-YSIDFTEKGFPGKEAQV------YRELVKLPPLSDELKATV--LASETVGPAI-GEELRRNAVMAVLVGLGLIWGVASIVAGMYSLLGLEFSIPTIAALLTIVGYSINDS----IVVSDRRENQKLLRHLPQTLSRTVMTSLTTLLILALLFGGSVLRDFAL
3PROSPECT21ejlI0.0551.0001.331threading_3VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRSFLGKTDCSPIQFESAWALTNIEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACRNKNPAPPTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGVYLVHCGIIEPLMNLLTKIIQVILDAISNIFQAAEIEKYFS
4PROSPECT21t33A0.0930.7481.282threading_4MNKGEQAKSQ-----LIAAALAQFGEYGLHAGQNIAAITYYF-GSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPT----------------------------------------------------SAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHA------LLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLI-----LHGLTQ
5PROSPECT23qxyA0.0801.0001.261threading_5LDPVACFLSSIGGLLEVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQSIVLPFMEAHLRVRSLELYHQLVALVMAYSFQEPLEKEPNSPNHLANHNTQPIPKGHEIFNTYGQMAFVEPYPDNTDEAALQGTKTEAERHLVYERWDREEVLTEEELTTTLKVLCMPAEEFRELKDNIPKLKASWRQLLQNSVLLTDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELTS
6PROSPECT21ee4a0.0841.0001.248threading_6LPQMTQQLNSDDMQEQLSATVKFRLVEFMRENQPEMLQLEAAWGTSAQTKVVVDADAVPLFIQLLYVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTEYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVITISNITAGNTEQIQAVIKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLNRIIEVTLDALENILKMGEADKEAR
7MUSTER3cucB0.1100.8980.724threading_7-SNIKQLYSKWKSLQPLKPEDLKRWNDKF---KLEFNYNSNHLGNTLTYGQTKLLLFASLKDYEEKAHNVGLEIKQEAQDKERPLTESFIRELNRTILV-----------QDYWIKVGEYKSRPNSVLTATGEVFSYASPEETPAFTSLVDWYN------LEADKGILTPVELAALLHYRYIRIHPGNGRIARLLVNFVL--HRYGYPIVI-HSEDKSNYLNILHQCDVEAGLTPSDGAATLNDILPFVNYLSSCLIRSLTLAIKAAK----IE
8SPARKS2xwub0.1170.9710.672threading_8FPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVY-------RPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLYSWQHTEALLYGFQSIAE
9PROSPECT23a0oA30.0750.9781.244threading_9LSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMRHLAIAGRVLGRDDLLDASRKWLLADEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTR------EVADHVIAHARIHVFPYDSQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLP
10PPA-I3g61A10.0910.8470.812threading_10YMLVGTLAAIIHGVALPLMMLIFGDMT------DSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVG------------------------------------ELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQAL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.671 to 1xm9A
SCOP code=a.118.1.24
TM-score=0.386 to 2ojeD
SCOP code=a.202.1.1
TM-score=0.649 to 1wa5B
SCOP code=a.118.1.1
TM-score=0.800 to 1t33A
SCOP code=a.4.1.9
TM-score=0.565 to 1p0yB
SCOP code=a.166.1.1