Template-based Modeling Results for RHTB_ECOLI

Submitted Primary Sequence

>Length 206
MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA
35122000000000000001000000001100120110000000000000000000000000000010110020010000000000000002121223232222232222000200000010010000000000100124222001000000000000000000000002100111301301200110000000000010012344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA
1	SPARKS	1zsya	0.109	0.850	1.079	threading_1	IPLQSAVNPCTAYRMLMLQPG-DSVIQ------NA-------SNS-GVGQAVIQIAAALGLRTINPDIQKLSDRLKSLGAEHVI--TEEELRRPEMKNFFKDMPQPRLGKSSTELL--RQLARGGTMVTYGGMAK--QPVVASVSLLIFKDLKLRGFW----------LSQWKKDHSPDQFKELILTLCDLILQDYQSALEASMKP
2	PROSPECT2	1t33A	0.082	0.951	1.174	threading_2	MNEQAKSQLIAAALAQFGEYGLHTRDIAALAITYSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVID-----PLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGL-----TQ
3	SPARKS	1iyza	0.140	0.762	1.077	threading_3	LSPEEPVSFLTAYLALKARPG-EKVLVQ-------------AAAG-ALGTAAVQVARAMGLRVLAASRPEKLALPLALGAEEAAYAVPERAKAWGGLDLVLEVRGKEVEESL------GLLAHGGRLVYIG------AAEAPIPPLRLMRRNLAVL------------GFWLTPLLREGALVEEALGFL----------LPRLGRE
4	PROSPECT2	3a0oA3	0.069	0.985	1.160	threading_4	LNSEQLSAFADA---VAKDPNHCGWAEFYEKSNTRVATLWRQMYIDCQEVIYAIRHLAIAGFRVVVALAWGYDWLTVRSVLLRTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGEWLDYTVEFLATLYSPAEGPHYWMTGMAYLIEAANLIRSLKLGYNVRQFAGVTGNGHYQWYFDHIKADALNFDDLVYRHDYPQ
5	SPARKS	1kola	0.120	0.850	1.053	threading_5	CLSDILPTGYHGAVTAGVGPG-STVYVA------G--------AG-PVGLAAAASARLLGAAVVIVLNPARLAHAKAQGFEIALHEQIAALLGEPRGHGHEGAKHEAPATVLNSLMQV--TRVAGKIGIPGLYV---TEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMW--D--------RINIAEVV
6	PROSPECT2	1oyzA	0.091	0.961	1.149	threading_6	LNDDELFRLISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQACVRATAIESTAQRCKKNPIYSPKIVEQSQITNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVE-LQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELIIEAAGELGDKTLLPVLDEIITSAIDKLK-------RS
7	SPARKS	1e3ja	0.161	0.845	1.038	threading_7	VSLEEGALLEPLSVGVHACLG-TTVLVI------G--------AG-PIGLVSVLAAKAYGAFVCTARSPRRLEVAKNCGA------------DVTLVVDPAKEEESSIIERIRSATIDCSGNEKCITIGINI----TRTGGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRVKQLVTHSFKLEQTVDAFEAARKKAD
8	PROSPECT2	1pw4A2	0.072	0.874	1.111	threading_8	LPNKLLWYIAIANVFVYL-----LRYGILDWSPTALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV-------------YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK--------AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVELVP
9	SPARKS	2j8za	0.130	0.898	1.002	threading_9	LTLTQPEAWLTAFQLLHVQAG-DYVLIH-------------AGLS-GVGTAAIQLTRMAGAIPLTAGSQKKLQMAEKLGAAAGFSEATLKFTKGAGVNLILDCIGGSYWEKNVNC-----LALDGRWVLYGLMGG-GDINGPLFSKLLFKRGSLITSNKYKQMLVNAFTEQILPHFSTQRLLPVLDRIYPVTEIQEAHKYMEANKN
10	PROSPECT2	2bkuB2	0.083	1.000	1.108	threading_10	AQSLQELQSNILTVLAAVIRKDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFELETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVPENGTLEALDYQIKVLEAVLDAYVGIVFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDYIKRTRSG

Predicted Tertiary Structure


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TM-score=0.692 to 1qorA SCOP code=b.35.1.2	TM-score=0.894 to 1t33A SCOP code=a.4.1.9	TM-score=0.730 to 1iyzA SCOP code=b.35.1.2	TM-score=0.537 to 1cemA SCOP code=a.102.1.2	TM-score=0.710 to 1kolA SCOP code=b.35.1.2