Template-based Modeling Results for RLMI_ECOLI


  Submitted Primary Sequence

>Length 396
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
CCEEEEECCHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCEEEECCCCCCCEEEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
441102023231200343000001000231323122020010112312100100012212000000113322211111002102201210221143321200000002132010000010030000101120022112100100120123100012231223232223222100213233221102210020000022123111112111011001210322100000101000000002110110000110330010022003214032220100110012003103432330000001013123232301100300220011002004320000000011202231012000200341212010022132121120012123121010000102
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
1MUSTER3c0kA0.9820.9753.075threading_1-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF-DVIVDPPKFVENKSQ-LGACRGYKDIN-LAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
2SPARKS3c0ka0.9820.9756.139threading_2-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGEL-TQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFD-VIVDPPKFVENKSQL-GACRGYKDI-NLAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
3PROSPECT23c0kA0.9590.9755.343threading_3-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPAL-LPIEEHGKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR-GEKFDVIVDPPKFVENKSQL-GACRGYKDIN-LAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACR-V
4PPA-I2cwwB0.3690.9653.928threading_4--MRIQVNAKGAARLLSRHLWVFRRDVVSGPETP----GLYPVYWGRRFLALALYNPHTDLAVRAYRFAPAED-PVAALLENLAQALARREAVLRQDPEGGYRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQ--SVLAKNDARTRELEGLPLYVRPLLGEVP-ERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMER-FRGERALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLG--NVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL
5HHPRED-l2b78_A0.2400.9474.469threading_5MI-KLMVGSFAEKKLKRGVQLLSSRDYPNL---NLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKI----RF----NVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNEINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF-----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYL--DLQQLPSDFAVNVQDESSNYLKVFTIKV-
6HHPRED-g2b78_A0.2410.9444.971threading_6-MIKLMVGSFAEKKLKRGVQLLSSRDYPNLN---LDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPFLGAYEKI-----RF----NVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNEINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF-----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL--QQLPSDFAVNVQDESSNYLKVFTIKV-
7SP33c0ka0.9720.9756.341threading_7-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGE-LTQGPVTGELPPALLPI-EEHGKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFD-VIVDPPKFVENKSQLG-ACRGYKDI-NLAIQLLNEGGILLTFSCS-GLTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
8SAM-T993c0kA0.9920.9755.936threading_8-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSA-LGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV-DPPKFVENKSQL-GACRGYKDIN-LAIQLLNEGGILLTFSCSGLTS-DLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
9MUSTER2cwwB0.3660.9653.024threading_9M--RIQVNAKGAARLLSRHLWVFRRDVVSGPET---PGLYPVY-WGRRFLALALYNPHTDLAVRAYRFAP-AEDPVAALLENLAQALARREAVLRQDPEGGYRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQ--SVLAKNDARTRELEGLPLYVRPLLGEVPER-VQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMER-FRGERALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGL--GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL
10SPARKS2b78a0.2430.9446.004threading_10-MIKLMVGSFAEKKLKRGVQLLSSRDYPNLNL---DNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPFLGAYEKIRFNVS---------AHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNELNGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFE-----VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGF--GKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.905 to 2as0A
TM-score=0.996 to native
SCOP code=b.122.1.9
TM-score=0.907 to 2as0A
TM-score=0.997 to native
SCOP code=b.122.1.9
TM-score=0.910 to 2as0A
TM-score=0.997 to native
SCOP code=b.122.1.9
TM-score=0.907 to 2as0A
TM-score=0.997 to native
SCOP code=b.122.1.9
TM-score=0.980 to 2cwwB
TM-score=0.889 to native
SCOP code=b.122.1.9

  Experimental Structure

Download 3c0kA
SCOP code=b.122.1.9