Template-based Modeling Results for RSGA_ECOLI


  Submitted Primary Sequence

>Length 350
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
54433224223221233334323224332313332113322000001012101021331200101023224210200100011133223223220001101322110113323311100001100000000121312220011000002213010000000110033301210221021132122200000132331031012001210000001111010001110022222122331233222132212001002013200001000023211231223101200110120022031220213221101012003323023200210120031012122332224335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
1MUSTER2rcnA0.9420.7942.793threading_1----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGKV-------KGIVEAVHERTSVLTRP-----VKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ-------------NEILTNTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
2SPARKS2rcna0.9350.7945.961threading_2----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGK-------VKGIVEAVHERTSVLTRPV-----KPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-------------LQNEILTNTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
3PROSPECT22yv5A0.3690.8205.025threading_3MGK---------------------------------KELKRGLVVDREAQMIGVYFEDGKTYRGIPRGKVLKIYAGDYVWGEVVD------PNTFAIEEVEERKNLLIRP--------KVANVDRVIIVETLMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTG-----------EELRTQEVTTTGVRLIPFGKGSFVGDTPGFSKVEATFVKPREVRNYFREFLRYQ--CKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELC---RED
4PPA-I2rcnA0.9350.7944.085threading_4----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGK-------VKGIVEAVHERTSVLTRPV-----KPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-------------LQNEILTNTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
5HHPRED-l1u0l_A0.3930.7775.405threading_5-------------------------------------LRRRGIVVSFHSNMVTVEDEEGERILCKLRGKFRKIYVGDRVEYTPDE------TGSGVIENVLHRKNLLTKPH--------VANVDQVILVVTVMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDDLRKVRELEEIY-SGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINPG-LKLR-------------TTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGD--KQCFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR----------
6HHPRED-g2rcn_A0.9530.7915.541threading_6----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGK-------VKGIVEAVHERTSVLTRP-----VKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-LQNILTN-------------TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
7SP32rcna0.9280.7945.897threading_7----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRP-------GKVKGIVEAVHERTSVLTRPV-----KPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLG-------------LQNEILTNTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
8SAM-T992rcnA0.9570.7945.219threading_8----------------------------------LFGEPAEGIVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGK-------VKGIVEAVHERTSVLTRPV-----KPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQNEILTN-------------TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA-------------
9MUSTER2yv5A0.3660.8202.560threading_9---------------------------------MGKKELKRGLVVDREAQMIGVYLEDGKTYRGIPRGKVLKIYAGDYVWGEVVDPN------TFAIEEVEERKNLLIRPK--------VANVDRVIIVETLMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTGEE-----------LRTQEVTTTGVRLIPFGKGSFVGDTPGFSKVEAMFVKPREVRNYFREFLRYQ--CKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKEL---CRED
10SPARKS2yv5a0.3690.8205.456threading_10---------------------------------MGKKELKRGLVVDREAQMIGVYLEDGKTYRGIPRGKVLKIYAGDYVWGEVVDP------NTFAIEEVEERKNLLIRPK--------VANVDRVIIVETLMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTG-----------EELRTQEVTTTGVRLIPFGKGSFVGDTPGFSKVEAMFVKPREVRNYFREFLRYQ--CKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLE--EIKELCRED-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.806 to 1u0lA
SCOP code=b.40.4.5
TM-score=0.812 to 1u0lA
SCOP code=b.40.4.5
TM-score=0.811 to 1u0lA
SCOP code=b.40.4.5
TM-score=0.795 to 1u0lA
SCOP code=b.40.4.5
TM-score=0.811 to 1u0lA
SCOP code=b.40.4.5