Template-based Modeling Results for RSMD_ECOLI


  Submitted Primary Sequence

>Length 198
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
554343333120000002131241311322212111320120011001210230100100000000001002230100000111320021013002203212020010200100344222000000101154110220010023221024200000102332312211210100222212200010012233343539
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
1MUSTER3p9nA0.3450.8943.304threading_1---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
2SPARKS3p9na0.3450.8944.532threading_2---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
3PROSPECT23p9nA0.3450.8944.191threading_3---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDSVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
4PPA-I3p9nA0.3450.8943.697threading_4---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
5HHPRED-l2fpo_A1.0000.8843.489threading_5---------GQIRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
6HHPRED-g2fpo_A1.0000.8843.965threading_6---------GQIRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
7SP33p9na0.3450.8944.839threading_7---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
8SAM-T992fpoC1.0000.9045.321threading_8---------GQIRIIGGQWRGRKLPVPD--GLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
9MUSTER2fpoC0.9940.9043.261threading_9---------GQIRIIGGQWRGRKLPVPD--GLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIED-RAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
10SPARKS2fpoa0.9660.8844.026threading_10---------GQIRIIGGQWRGRKLPV------PDSTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIED-RAVSQQLIKNLATLKAGNARVVNSNASF-LAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.857 to 2fhpA
TM-score=0.893 to native
SCOP code=c.66.1.46
TM-score=0.851 to 2fpoC
TM-score=0.890 to native
SCOP code=c.66.1.46
TM-score=0.857 to 2fhpA
TM-score=0.893 to native
SCOP code=c.66.1.46
TM-score=0.853 to 2fhpA
TM-score=0.888 to native
SCOP code=c.66.1.46
TM-score=0.857 to 2fhpA
TM-score=0.893 to native
SCOP code=c.66.1.46

  Experimental Structure

Download 2fpoC
SCOP code=c.66.1.46