Template-based Modeling Results for SAPB_ECOLI

Submitted Primary Sequence

>Length 321
MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR
211100200110000000000000000200220114110001000100100021010101222210021022001000110000000000000000000012433121100000010010001001000000000120110101021112121421101000001112122112100000100000000000000010010001100211212001001122023100000000110000000100010010011000001001010001000100232111000000000000000010000000000002102212234
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR
1	MUSTER	2onkC	0.135	0.760	0.922	threading_1	-----MRLLFSALLALLSSIILLFVLLPVAAT--VTLQLFFDEFLKAASD-----------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFP-GKSVVEGIVDLPVVIPHTVAGIALLVVFG---GLI---G---------SFSPLKFVDA------------------LPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISGAVVV--IAYYPMAPTLIYERYLSEGLS----AAMPVAAILILLSLAVFVALRII------------
2	SPARKS	2onkc	0.143	0.763	1.542	threading_2	------MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASD-----------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGK-SVVEGIVDLPVVIPHTVAGIALLVVFG-SSGLI---GSFSPLKFVDALPGIVVAMLFVS---------------------------VPIYINQAKEGFAS-VDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISGAVVPMI------APTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG--------------
3	PROSPECT2	1ejlI	0.113	0.997	1.576	threading_3	SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTLTNIASGTSEQTKAVVDAIPAFISLEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLHHNDPEVLADSCWAISYLTDGPNERIEMVVPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPKTNIQKEATWTMAGRQDQIQQVVNHGLVPFLAAWAITNYTSGGTVEQIVYLVHCGII-EPLMNLLSAKDTKIIQVILDAISNIFQAAEKLSIMIEECGNESVYKASLNLS
4	PPA-I	3d31C	0.121	0.769	1.881	threading_4	PLTFVFSFLLLVLFLFIFLTLSNMIFEQ-----------ITEDFSGLVKAAGN--------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFP-GKRLVESIIDVPVVVPHTVAGIALLTVFG-------SRGLIGEPLES------------YIQFRDALPGIVVAMLFVSMPYLANSAREGFKSV-----------DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR------------------
5	HHPRED-l	3tui_A	0.172	0.651	4.980	threading_5	-------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTS-I-----------------------------------GL---QAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----------
6	HHPRED-g	3tui_A	0.182	0.651	5.138	threading_6	-------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGT---S------------------------I---------GLQAAIVP---LTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----------
7	SP3	3dhwa	0.184	0.611	1.563	threading_7	------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIG---------------------------------------LQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMG-GAVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGD------------------
8	SAM-T99	1vhnA	0.142	0.352	0.677	threading_8	VKVGLAPAGYTDSAFRTLAF-------------------LVARGAIGRPWIFIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVERKFLAGYTKDLKGARRFREKVKIEEVQI---------------------------------------------------LKEFYNFIKEV------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3d31C	0.140	0.757	0.913	threading_9	PLTFVFSFLLLVLFLFIFLTLSNMIFEQI-----TE---DFSGLVKAAGN-----------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFP-GKRLVESIIDVPVVVPHTVAGIALLTVFG---GLI---GE--PLESYIQFRD-----------------------ALPGIVVAMLFVSMPYLANSAREGFKSV-DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISGAVVI--LAYYPMGPTLIYDRFISYGLS----ASRPIAVLLILVTLSIFLVIR--------------
10	SPARKS	3d31c	0.109	0.769	1.450	threading_10	----------PLTFVFSFLLLVLFLFIFLTLSNMIFE--QITEDFSGLVKAAG-N------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPG-KRLVESIIDVPVVVPHTVAGIALLTVFG-SRGLI-GEPLESYIQFRDALPGIVVAMLFVS---------------------------MPYLANSAREGFKS-VDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.798 to 2onkC SCOP code=f.58.1.1	TM-score=0.423 to 1kn1B SCOP code=a.1.1.3	TM-score=0.771 to 2onkC SCOP code=f.58.1.1	TM-score=0.780 to 1ialA SCOP code=a.118.1.1	TM-score=0.851 to 3d31C SCOP code=f.58.1.1