Template-based Modeling Results for SERC_ECOLI


  Submitted Primary Sequence

>Length 362
MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCEEEEEECCHHCCCCCCHHHCEEEEEEHHHCCCCCCEEEEEECHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
45221111100020023002201221211311121103101203201200220031022003133312000010002000000001002332200000002001100210331122100102123322321321321222330100000111113001023133122300000000010002201122000000002300121000000013300230322012000000013212122000000010001002103421012201200221031000002303112231132220311000101222102100210231102113112201000000011022300300020022115335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
1MUSTER1bjoA0.9970.9943.161threading_1--QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
2SPARKS1bjna0.9940.9926.371threading_2--QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQN-IGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
3PROSPECT23m5uA0.4040.9505.305threading_3--RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSI-EISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAIPNLALNGV---CEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPR---VEFSDNADYAYICSNNTIYGTQYQNYPKTK--TPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDLERSKNKQIP-SLNYLTHAENQSLFNTPPTFAIYF--NLEDWLLNQGGLDKVHEKNSQKAT-LYECIDLSNFYKGHADKKDRS-LNVSFNIKNKDLEPLFVKEAEEAGI-GLKGHRILGGIRASIYNALNLDQVKTLCEFK-EFQGKYA
4PPA-I1bjoA0.9970.9944.352threading_4--QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
5HHPRED-l2fyf_A0.1970.9562.593threading_5KPRDGRFGSGPSKVRLEQLQTLTT-------TAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI--DKRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPE-----PQTDPSVDVIAWAHNETSTGVAVAVRREGSD-ALVVIDATSGAGGLPVDIAETDAYYFAPQKNASDGGLWLAIMSPAALSRIEAIVPDFLSLPIAVLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGQLRVAMFPAVEPDDVSALTECVDWVVERL-
6HHPRED-g2fyf_A0.2000.9534.515threading_6KPRDGRFGSGPSKVRLEQLQ-------TLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDK--RSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGS--AP---EPQTDPSVDVIAWAHNETSTGVAVARPEGSD--ALVVIDATSGAGGLPVDIAETDAYYFAPQKNFADGGLWLAIMSPAALSRIGRWVPDFLSLPIAVEKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGQLRVAMFPAVEPDDVSALTECVDWVVERL-
7SP31bjna0.9940.9926.719threading_7--QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQN-IGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
8SAM-T991bjoA0.9970.9946.159threading_8--QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG
9MUSTER3m5uA0.3860.9533.118threading_9--RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSI-EISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAIPNLAL---NGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPR---VEFSDNADYAYICSNNTIYGTQYQNYPKTK--TPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDLERSKNKQIP-SLNYLTHAENQSLFNTPPTFAIYFN--LEDWLLNQGGLDKVHEKNSQKATLYECIDLSNGFYKGHADKKDRS-LNVSFNIANKDLEPLFVKEAEEAGI-GLKGHRILGGIRASIYNALNLDQVKTLCEFKEFQGKY-A
10SPARKS1w23a0.4090.9925.992threading_10VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGET-HIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEIN-HAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKENA-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.996 to 1bjoA
TM-score=0.999 to native
SCOP code=c.67.1.4
TM-score=0.952 to 1bt4A
TM-score=0.941 to native
SCOP code=c.67.1.4
TM-score=0.994 to 1bjoA
TM-score=0.997 to native
SCOP code=c.67.1.4
TM-score=0.952 to 1bt4A
TM-score=0.939 to native
SCOP code=c.67.1.4
TM-score=0.996 to 1bjoA
TM-score=0.999 to native
SCOP code=c.67.1.4

  Experimental Structure

Download 1bjoA
SCOP code=c.67.1.4