Template-based Modeling Results for SIRB1_ECOLI

Submitted Primary Sequence

>Length 269
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH
CCCHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH
44312213233020020000001212231212201210230021024302322223200220010001101030132113001000002003223100000000001003303020100011210001020332311001112132113300110032212321322231023031220021001002100222221210020010003011310210120010012020131003001200320232210200220023124332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH
1	MUSTER	2gw1A	0.079	0.985	0.966	threading_1	ELTFANY-DESNEADKELMNGLSNLYKRSPYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHE-DIKKAIELFPRVNIYMALIMADEYYNY--SNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACNKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKAENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDDEAIT
2	SPARKS	2vyia	0.109	0.476	1.835	threading_2	---------------------------------------------------------------------------------------------------------------------------------------GPLEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP---
3	PROSPECT2	2qfcA	0.110	0.881	1.291	threading_3	AEKLGSEQLSENICHQSEVLQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT------------------------GIDVYQNLYIENAIANIYAENGYLKKGIDLFEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIMALIGQLYYQRGECLRKLEYEEAEIEDASFFFDILEMHAYKEALVNKISRL--------
4	PPA-I	2vq2A	0.101	0.736	0.942	threading_4	----------ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSD--------PKNELAWLVRAEIYQYLK-------VNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLN----------------------------------RPAESMAYFDKALADPTYPT------------PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAA
5	HHPRED-l	1ihg_A	0.181	0.926	1.477	threading_5	PRVFFDVDIGGERV--G--RIVLELFADIVPKTAENFRA-LCTGEKKRIKQGGDFSNQNESIYHYKHGLLSMANAGTPHLDGKHVVFGQVI---KG---------MGVAKILEVEVK-GEKPAKLCVIAECGDDWGIF-PKDGGDSVDLKDVDKILKGNSQNWEMAIKKYTKVLKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKAQKDKEKAA-
6	HHPRED-g	2dba_A	0.126	0.532	1.277	threading_6	-------------------------------------------------------------------------------------------------------------GSSGS-------SGMTVSGPGTPEPR-----PATPGASSVEQLRKEGNELFGDYLAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVF---QEALRNISGPSSG--
7	SP3	1ihga	0.114	0.978	1.913	threading_7	ESIYGEFEDENFHYDKEGLLSMANAGSNTNGSQFF-----ITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV-EGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKE
8	SAM-T99	2hyzA	0.103	0.435	2.873	threading_8	---------------------------------------------------------------------------------------------------------------------------------------------YLGNAYYKQGDYDEAIEYYQKALELDPRSAEA----------WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA-
9	MUSTER	3fp3A	0.097	0.996	0.939	threading_9	LLRRASANESLGNFTDAMFDLSVLSNGDFDGASIEPMLERNLNKQAMKVLNEPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQR-SATDEGYLVANDLLTKSTDMENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDQEKIH
10	SPARKS	2dbaa	0.135	0.550	1.834	threading_10	-------------------------------------------------------------------------------------------------------------GSSGSSGMTVSGPGT-------PEPRPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNK---VFQEALRNISGPSSG--

Predicted Tertiary Structure


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TM-score=0.582 to 1elrA SCOP code=a.118.8.1	TM-score=0.656 to 2vyiA SCOP code=k.38.1.1	TM-score=0.716 to 2vyiA SCOP code=k.38.1.1	TM-score=0.605 to 2vyiA SCOP code=k.38.1.1	TM-score=0.654 to 2q7fA SCOP code=k.38.1.1