Template-based Modeling Results for TDCG_ECOLI


  Submitted Primary Sequence

>Length 454
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
CCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
5400100021000011010000010021002203311223212201010000002103120001000100122113312132021002102321201122212201122232000123112303100100012344310110000011100010221222331322121212000100300332212000001112111213220120013002002201331132312011212122200101221222332221110000000000000122201112011011111000000000002322421222000200000000000021111000111102110000000000000201212220002001100301000101112120200001110000020000010002212213010120020012003301210211131100120114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
1PROSPECT21gw5b0.0930.9431.360threading_1VKKVIAAMTVGCMQTDNLEL--KKLVYLYLMNYAKSQPDMAIMAVNS----FVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKHDINAQMVEDQGFLDSLRDLIADSN------------------PMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCNYNPKDDREAQSICERVSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVVDFVRKAVRAIGRCAIKVEQSAERCVST--LLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTKKPSETQELVFV
2SPARKS2iafa0.4330.2952.992threading_2---------------SSHTVGPL-AANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPESIPRH-------EILDSNLLNL-AGKKEIPFHEATDFLFLQKLLPKHSNG-RFSAFDGNANLIEQVYYSIGGGFITTEEDFDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3PROSPECT22aj4A0.1170.8261.238threading_3VISIIKKFYVTIDPSVSDWSNYFKCGSFLKKLAPERFASAPLAGLQVFCEGDVP-TGSGLSSSAAFVVKANMGPGYHMSKQNLMRITVVAEHYVGVNCGEEDHALYVEFKPQLKATPKFPQLKNHEISFVIANT-----------------------LVVSNKFETAPTNYNLRVVEVTTAAN------VLAATYGVVLLNKGNLRDFMNVYYARYH-------NISTPWNGDIESGTKMLVLVEESLANKKQGFSVDDVAQSLNCSREEFTRDYLTTSPVRFQVLK--------LYQRAKHV--------YSESLRVLKAVKLMTTFTADEDFFK-----QFGALMNESQASCDKLYECSCPEIDKICSIALSNGSYLTGAGWGGCTVHLV---------------------PGGPNGNIEKVKEALANEFYKTDAELENASKPALGSCLYEL
4PPA-I2iqqA0.4290.3081.264threading_4---------------SSHTVGP-LAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASIPR--HEILDSNLLNLA-GKKEIPFHEATDFLFLQELLPKHSNGRFSAFDGNANLLIEQVYYSIGGGFITTEEDFDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5PROSPECT21jdha0.1090.8721.237threading_5AVELTKLLNSKKEASRHAIMRSPQMVSAIVRTMQN----TNDVETARCTAGTLHNLSHHREGLLAILVKMLGSPVDSVLFYAITTLHNLLLHQEGA--------------KMAVRLAGGLQK----------------------------MVALLNKTNVKF--------LAITTDCLQILAYGNQESKLIILANIMRTYTYEKLLWTTSRVLKVLPAIVEAGGMGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVTCAAGILSNLTCNNYKNKMMVC-QVGGIEALVRTVLRAGDREDITEPAICALRHLMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLAHQDTQFVEGVRMEEIVEGCTGALNIQRVAAGVLCELAQDKEAAEAITAPLTELLHSRNEGVATYAAAVLFR---MS
6HHPRED-l2iaf_A0.4510.2939.719threading_6---------------SSHTVGP-LAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPE-------IPR-HEILDSNLLNLA-GKKEIPFHEATDFLFLQELLPKHSNG-RFSAFDGNANLIEQVYYSIGGGFITTEEDFDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7HHPRED-l2hp0_A0.1380.5291.144threading_7-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTT----------KLAEKVVSAWKAKISQPALKAAQDGVIDTVAAAL-GGVTEH-----------SVQVALKYVAAGSGLWGSN-FDAAFVNG-AAHAIDFDDSF---PV-RGHPSSSLVPAIFAV-GEH-VGANGHNCLKSYVLGIEVVATLGRAVGKGHYLAGWHPTSTLGVFGATTAAALLLGADEEQLRNAWGIAASNSCGIIKNF-GT--TKP---HTGSAARNGVLSAWLS-QSFTGCQTVFDDAILA-YG-AQPGPELFNA-QFPGLYKKSSC-
8HHPRED-g2iaf_A0.4510.2938.838threading_8---------------SSHTVGP-LAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPE-------IPR-HEILDSNLLNLA-GKKEIPFHEATDFLFLQELLPKHSNG-RFSAFDGNALLIEQVYYSIGGGFITTEEDFDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9PROSPECT21ejlI0.1150.8021.216threading_9VEDIVKGIN---SNNLESQLQATQAARKLLDNIIRAGLIPKF----------VSFLGKTDCSPIWALTNIASGTSEQTKAVVDGGAIPAFIS---------------------------LLASPH-----------------------------AHI-------------SEQAVWALGNIAGDGSAFRDLVIKHGLALLAVPDLSTLACGYLRNLTWTLSNLCRNK----NPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNEKKGVQLVKLLGATELPIVTPALRAIGNIVTGT--DEQTQKVIDAGALAVFPSLLTNPKTSNITAGRQDQIQQVVNHGLVPFLVKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEKIIQVILDAISNIFQAAEKLGETEKLSIMILDKIEALQRHENESVYKASLN--LIEKYFS
10SAM-T992iqqA0.4290.3085.522threading_10---------------SSHTVGP-LAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASIPRH--EILDSNLLNLAGKKEIPFHEATDFLFLQKELLPKHSNG-RFSAFDGNALLIEQVYYSIGGGFITTEEDFDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.601 to 2vglB
SCOP code=i.23.1.1
TM-score=0.611 to 2iqqA
SCOP code=d.81.2.1
TM-score=0.591 to 1pieA
SCOP code=d.14.1.5
TM-score=0.645 to 2iqqA
SCOP code=d.81.2.1
TM-score=0.605 to 1wa5B
SCOP code=a.118.1.1