Template-based Modeling Results for TORC_ECOLI

Submitted Primary Sequence

>Length 390
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHCCCHHHHHHCCHHHHHHCEECCEEEECCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
333012113312220000000000000000000001110210221200110011220022023111232221120201102012201000121020012010000022132233132321200220122134231210210133322212322330021022114331000100300013123222112320231322233222210001011012242343220101110202102332310101020012321221000211021000000213023302223212123332301201010103313003102200210120012002201111322201131010002001111212331020012001211422223232344348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
1	PROSPECT2	1sp3A	0.134	0.879	1.522	threading_1	ANPHKDVLKGPFTTGSEVTTQCLTQATDMMKTSHWTWELEQKLPDRTVVRGK-------KNSINNFCVAISSNEPRCTSCHAGYGWFDFKDKTKVDCLICHDTTGTYVKDPAGAGEPMAKLDLAKIAQNVGAPVRDNCGSCHFYGKHGSMAYPDKATDVHMDSDGNNFQCQNCHTTEKHQISGNAMHSNKKLNTHTATVAQYGKHTYQKKKGNFVWEKMVKPQYAKMDSNVVTKLTYPMGDFKVHTGKQIYDKKLNIFITPKTYGKGGYWSEFDKLGMEANPTMLE-KGIKYSGEYDFAATEMWWRINHMVSPKEQ---------ALNCNDCHNKGTRLDWQALGY------------------------------QGDPMKNKQGPKHK
2	SPARKS	2j7ac	0.273	0.367	3.442	threading_2	------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMNPVGVTHKLSGH------ANISCNDCHAPHNLLKLPFKAIAGARDVYMNTLG---------HPGDLILAGMETKEVV---NANCKACHTMTNVEVASM------------EAKKYCTDCHRNVQHMMKPISTREVAD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	2ot4A	0.080	0.903	1.459	threading_3	NTQIEDMHTVGKATVNCVHCHDATEHVETASSRRMGERPVTRMDLEACATCH--TAQFNSFVEVRHESHPRLEKATPTSRSPAGHGFAFEHAEPRSHAFMLVDHFVVDRAYGGRFQFKNWQKVTDGMGAVATAANPVCLNCKTDEHEAAKWSRTSEVVEFARDLNHPLNCFMCHDPHSAGPRVVRDGLINAVVDRGLGTYPHD---------------------PVKSEQQGMTKVTFQRGREDFRAIGLLDTADSNVMCAQCHVEYN--------------CNPGYQLSDGSRVGMDDRRANHFFWANVFD-YKEAAQEPRDMMGQACLNCHAEWTEDQALYDYIKNYTHGKIVKAGVSEDVLNEARELHYDATAENSVGFHNDAQVAS
4	PPA-I	2j7aR	0.271	0.369	2.743	threading_4	------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMNPVGVTHKLSGH------ANISCNDCHAPHNLLKLPFKAIAGARDVYMNTLG---------HPGDLILAGMETKEV---VNANCKACHTMTNVEVASM------------EAKKYCTDCHRNVQHMRMKPISTREVAD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-g	1fgj_A	0.155	0.846	2.273	threading_5	YEALVKRYKDPAHGAGKGTMGDYWEPIAISIYMDPNTFKEVAER-KDCVECHSDETPVRAWKRSTHANLDKIRNLKSDDPLYYKKGKLEEVENNLRSM-------G-KLGEKETIDCHNKKDKADHTKDIRMPTADTCGTCHLREFAERESLDYTANWATMPQREVAEGCTMCHTNQNHTRHEFS----AA--E-SR--------------KPEA---CATCHSGVDHNNWE----------------AYTM--SKHGKLAEMNRDKNWEVRLKDAFSAHMYEGEYTHNITRKTRWANYP-----FVPGIAENITSDWSEARDSWVLTCTQCHSE----RFARSYLDLMDKGTLEGLAKYQEANAIVHKMYEDGTLTGQKTNRPNPPEPE
6	HHPRED-l	2j7a_C	0.264	0.369	5.517	threading_6	-----------------K-LVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMNPVGVTHKLSGHAN------ISCNDCHAPHNLLAKLPFKAIGARDVYMN-TLGHPGDLILAGMETKEVVN-----------ANCKACHTMTNVEVAS------------MEAKKYCTDCHRNVQHMR--MKPIST--------REVAD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SAM-T99	1z1nX	0.160	0.672	2.374	threading_7	--------PKVDAIVIDTAAVFGKLEQPGVVFYHEKHTTALEKMAKDCTSCHVETEMAEQYH------------ANCMACHEK--------------------VVGSYPTAPQAAECKRCHVGPGVEGATVTPKDESCKACHKLVYAKGEEGS--CVYCHKQEPLPHESCVNCHLSAGPGPVAFDHKAHEGFVGNCVTCHHPTQTGGSLADGNFVTTAQSAHQLGVTTSCVGCHT---------------------------------TQANARKECAGCHAPMQKTAL----------------SQNSCIQCHEAGFPTSPSLNPPKCASCHSKP-FQERTANQ-PGCQGCHKP-----------------------------------
8	HHPRED-g	2j7a_C	0.271	0.369	5.304	threading_8	------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMNPVGVTHKLSGHAN------ISCNDCHAPHNLLAKLPFKAIAARDVYMN-TLGHPGDLILAGMETKEVVN-----------ANCKACHTMTNVEVAS------------MEAKKYCTDCHRNVQHMRM-KPIST---------R--EVAD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	PROSPECT2	1ezva	0.084	0.890	1.451	threading_9	AEVTSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQ-----KANLLSSSNFEATKKSVLKQVQDFE-------------DNDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKH---------EDLVNSIESKNLSLQT------------GTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLDTEVERAKSLLKLQLGQLYESGNP----VNDANLLGAEVLIKGSKLSLGEAFVKAWAGKRLWDQDQIEGLLDMMRW
10	SAM-T99	2j7aR	0.295	0.356	3.410	threading_10	------------------KLVLGGATLGVVALATVAFGMKYTDQRPFCTSCHIMNPVGVTHKLSGHAN------ISCNDCHAPHNLLAKLPFKAAGARDVYMNTLGHPGDLILAG------------METKEVVNANCKACHTMTNVEVASME------------AKKYCTDCHRNVQHMRMKPIST-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.357 to 2ozbE SCOP code=a.183.1.1	TM-score=0.706 to 1sp3A SCOP code=a.138.1.3	TM-score=0.646 to 1fgjA SCOP code=a.138.1.3	TM-score=0.329 to 2f5cA SCOP code=a.4.5.24	TM-score=0.514 to 1oahB SCOP code=a.138.1.3