Template-based Modeling Results for UBIB_ECOLI


  Submitted Primary Sequence

>Length 546
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEHHHCCCCEEEEEEECCEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
442310320110010000100120023120210020011011213232213200220020024111100200100031221013300310120234022131320121013203222031003202320100000100010202441220001012130220030002001200200230023133030220022013101200111210100220132034131010020023101310000110310201212102422220310022002000110031000001101000000223243010000000000202430121002000000221032002000301213332213201200220022014221221201200210020023131302110000010001020002200130100210220022003321223100310121022003202300310220132032223102211321222212201110000000000000000011222100000000000000001012323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
1MUSTER1b3uA0.1050.9430.939threading_1DSLYPIAVLIDELRVQLRLNSIKKLSTIALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFGPCLLPPLESLATVEEVVRDKAVESLRAISHEHS-------PSDLEAHF--VPLVKRLAG-GDWFTSRTSACGL--SVCYPRVSSAVKAELRQYFRNLCSDTPMVRRAAASKLGEFAKVELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLLPQEDLLVMPTL--EDKSWRVMVADKFTGPEITKVPAFQNLMKDCEAEVRAAASHKVKEFCEN--LSADCRENVILVSDANQHVKSALASVIMGLSPIKDNTIEHLLPLFLAQLKDECPEVRLNIISLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRV-RLAIIEYMPLLAGQLGVEFFEKLNSLCMAWLV--------DHVYAIREAATSNLKKLVEK-FGKEWAHATIIPKVLAMSGD--PNYLHRMTTLFCIN---VLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTVDVKYFAQE
2SPARKS1f3mc0.1380.5041.249threading_2----------------------------------------------------------------------------------------------------SDEEILEKLRSIVSVGDPKKKYTRFEK--IGQGASGTVYTAMDVATGQEVAIRQ--------------------------MNLQQQPK--------KELIINEILVMRENKNIVNYLDSYLVGDEL-------------WVVMEYLAG---GSLTDVVTETC----MDEGQIAAVCRECLQAQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITT-------------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG--EPPYLNENPLRALYLIATNGTQNPEKLSAIFRDFLNRCLDM-------DVEKRG--SAKELLQHQFLKIAKPLSSLTPLIAAAKEATK---------------------------------------------------------------------------------------
3PROSPECT21qgra0.1030.9962.013threading_3MELITIKFLERAAVENLPTFLVELSRVLANPAAGLQIKNSLTSKDPDIKAQYQQREVKNYVLHTLPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILKEEPSLEFTKANFDKESERHFIMQVVCEATQCPDTRVTIEAMKSDIDEVALQGIEFWSNVCDEEMDLNDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYMPTLIELMKDPSVVVRDTAAAINDVYLAPLEGLSAEPRSNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETDRPDGHQNNLRSSAYESLMEIVKNSTLVIMERLQQVLQMESHIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVYMEAFKPFLYAEYQVCLAAVGLVGDLCRA--LQSNIIPFCDEVMQLLLENLPQILSVFGDIALAIGGEFKKYLEVVLNTLQQDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAG
4PPA-I1b3uA0.0930.9270.979threading_4------------------YPIAVLIDELRNENSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFGDWFTSRTSACGL-FSVCYPRVSSAVKAELRQYFRNLCSDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPALVMPTLRQAAEDKSWRVR----------YMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAE-----VRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDENEVIGIRQLSQSLLPAIVE--LAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV----CGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQ
5HHPRED-l3pvu_A0.1170.7691.988threading_5VTFEKIF-SQKLGYLL----FRDFCLKHEAKPLVEFYEEIKKYEKETEERLVCSREIF-------DTYIMKE--LLACSHPFSKSAIEHVQGHLVKVPPDLFQPYIEEICQNLRG-DVFQKFIESDKFTIGRGGFGEVYGCRKADTGKMYAMKCLDK-------------------------------------KRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMAAEIILG-LEHMHNRFVVYRDLKPANILLDE----HGHVRISDLGLACDFSKKKPHAS--------VGTHGYAPEVLQKGVAYDSSADWFSLGCMLFKLLR--GHSPFRQKDK----HEIDRMTLTMAVSFSPELRSLLEGLL-------QRDVNRRLQEVKSPFFRSLFLQKYPPP-----------------------------DSDQRNFPLTISERQQEFDTINAETDKTKNKQLGHEEALGKDCIMHGYMS-KMG--------------WQRR-
6HHPRED-g2y7j_A0.1780.4952.201threading_6-----------------------------------------------------------------------------------------------------------------EL-PDWAAAKEFYQDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSP--------------------------EQLEEVREATRRETHILRQVA-------GHP-----HIITLSYESSSFMFLVFDLMRKGELFDYLTE-KVA-----LSEKETRSIMRSLLENNIVHRDLKPENILLDD----NMQIRLSDFGFSCHLEPGEKL-----------R------ELCGTPGYLAPEI----LKCS-MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM---LRMIM--EG---QYQFSSPEWD-------------------------------DRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER-----------------------------------------------------
7SP31o6ya0.1590.4511.251threading_7-------------------------------------------------------------------------------------------------------------------TP-SHLSDRYEGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--------------------------LARD-----PSFYLRFRREAQNAAALNAIVAVYDTGEAETPAGP--LP-------YIVMEYVDGVTL--RDIVHTEG----PMTPKRAIEVIADACQAGIIHRDVKPANIMIS----ATNAVKVMDFGIRAIAQ-----YLSPEQAR--GDSV-------------DARSDVYSLGCVLYEVLTPFTGDSPVSV-AYQHVREDPIPPSARHEGLSADLDAVVLKALAK-------NPE-NRYQTAAEMRADLVRVHN---------------------------------------------------------------------------------------------------------
8SAM-T993f69B0.2180.4781.330threading_8TTPSHLSDRYELGEILGFGGMSE------------------------------------------------------------------------------------------------------------------VHLARDLRDHRDVAVKVLRADLAR-------------------DPSF------------------YLRFRREAQNAAALNH----------PAIVAVYDTGEAIVMEYVDGVTLRDIVHTETPKRAIEVIADACQALNFSH--QNGIIHRDVKPANILIS----ATNAVKVVDFGI---------------------------ARAIADSGNSVQ--------------------------TIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV----LTGEPPFTGDSPVSVAYQHVREDPIPPSARHE----------GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN---------------------------------------------------
9MUSTER2ooeA0.1040.8790.815threading_9MAEKKLEENPY---LDAWSILIREAQNQPIDKARKTYERLVAQFPSSGR---FWKLYIEAEIKAKNVEKLFQRCLMKVLHILWKCYLSYVRETKGKLP-----SYKEKMAQAY-DFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAE---RITA--VRRVYQRGCVNMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRN-APSVPDMWKKYIQ-----WEKSNPLRTEDQTLITKR---VMFAYEQCLLVLHHPDIWYEAAQYLEQSSKLLAEKGDMNNA--------------KLFSDEAANIYERAISTLLKKNMLLYFAYAYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAE---------IKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD-------KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE--DNNTRVLFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKETALLVDR
10SPARKS1u5qa0.1870.5291.234threading_10---------------------------------------------------------------------------------------------------------DPDVAELFFKDDPEKLFSDLRE--IGHGSFGAVYFARDVRNSEVVAIKKMS------------------------YSGKQ-------SNEKWQDIIKEVRFLQK-----------LRHPN--TIQYRGCYLREHWLVMEYCLG---SASDLLEVHK---KPLQEVEIAAVTHGALQGNMIHRDVKAGNILLS----EPGLVKLGDFGSASIMAPANPYWMAPEVILAMDE------------GQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQSPALQSGHWSEYFRNFVDSCL-------QKIPQ-DRPTSEVRFVL-----RERPPTVIMDLIQRTKDAVRELDNLQYRKMKKILFQEA---------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.902 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.877 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.642 to 1yhwA
SCOP code=d.144.1.7
TM-score=0.639 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.853 to 1b3uA
SCOP code=a.118.1.2