Template-based Modeling Results for UBIE_ECOLI


  Submitted Primary Sequence

>Length 251
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
55333332122113212332113101300210031010001001101110012000100113412100000000010002003102320200000002200210121034221222021010103202133210000000000210212220020004003320100001013121310120000001200020020113123002100300321123310120034011210201101000000020113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF
1MUSTER3dtnA0.1930.8692.146threading_1LSE---------------------IKRKFDAVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRG---NLKVKYIEADYSKYDF-EEKYDMVVSALSIHHLEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSG--LTEEEIAAGYLDKDI----EMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFGRKT
2SPARKS3sm3a0.2300.7813.284threading_2--------------------------------------------------LDLYPIIHNYLQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDRSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGE--TEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGF
3PROSPECT23dlcA0.1650.8453.464threading_3GSENKKK---------------------FDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIA-DANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF-------------GNKELRDSISAEIRKNPDWKEFNRKNIS-QENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDI
4PPA-I3dlcA0.1650.8452.400threading_4---------------------GSENKKKFDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIADA-NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGN-------------KELRDSISAEIRKNPDWKEFNRKNISQ-ENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ
5HHPRED-l1im8_A0.1810.8371.552threading_5----------FIFD--------ENVAEVFPD-IQGYSNIITAIG----------L-AERFVTADSNVYDLGCSRGAATLSARRNIQPNVKIIGIDNSQP-VERCRQHIAAYHSEIPVEILCNDIRH--VEIKNAS-VILNFTLQFPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRT-ALENV-RTDSIETHKVRLKNVGFSQVEFQCFNFGS----IAVK-
6HHPRED-g1im8_A0.1800.8411.485threading_6----------FIFDE--------NVAEVFPD-IQRYSNIITAI----G-LAER------FVTADSNVYDLGCSRGAATLSARRNINPNVKIIGIDNSQP-VERCRQHIAAYHSEIPVEILCNDIRHVEIKNAS-VILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRTAL-ENV-RTDSIETHKVRLKNVGFSQVEFQCFNGS-IAVK-----
7SP33sm3a0.2350.7813.476threading_7-----------------------------------LD-LYPIIHNYL--------------QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDRSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETG--ETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGF
8SAM-T993mggA0.2500.7812.221threading_8----------------------------------------------------KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSHPEGKKAIEAWNCLIRSLVGRQIYPRVEPRVYIDSSKPELVDGFILKTIIPVEGVKIIKEEEWEKGIEELHKTAE-
9MUSTER3dlcA0.1670.8372.140threading_9-----------------------ENKKKFDKKGAKNDEISKTLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHNEIALKNIADA-NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF-------------GNKELRDSISAEIRKNPDWKEFNRKNISQ-ENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ
10SPARKS3dtna0.1930.8692.690threading_10---------------------LSEIKRKFDAVSGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEK-YPEATFTLVDMSEKMLEIAKNRFRG---NLKVKYIEADYSKYDF-EEKYDMVVSALSIHHLEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSG--LTEEEIAAGYLDKDI----EMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFGRKT

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.779 to 1im8A
SCOP code=c.66.1.14
TM-score=0.671 to 1y8cA
SCOP code=c.66.1.43
TM-score=0.662 to 1ve3B
SCOP code=c.66.1.43
TM-score=0.670 to 1y8cA
SCOP code=c.66.1.43
TM-score=0.675 to 1y8cA
SCOP code=c.66.1.43