Template-based Modeling Results for XYLH_ECOLI

Submitted Primary Sequence

>Length 393
MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS
544333332422222211220110100210000000000000000111221000310010011001000000000000001201001000000000000000121112100000000000100000000001223000000000000001000000121221121121012002110110000000000000000120201122322303121101100100000000000010022131011000000000000100022021000000001012003112030320200000000000000000000200111121011000000000000000111010100000000000000200010130210011001000000000011124335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS
1	PROSPECT2	1jdha	0.085	0.982	1.747	threading_1	AVVNLIRAIPENDEDQVKKEASRHAIMRSPQMVSAIVGIPALVKMLGSPVDSVLFYAITTLHNLLVKFLAITTDCLQILAYGNQESKLIILAGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAEDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANH--APLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGAL---HILARDVHNRIVIRGLNTIPLFVQLLY--SPIENIQRVAAGVLCELKEAAEAIEAEGA
2	PPA-I	3zuxA	0.118	0.733	1.102	threading_2	--------------------NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKW-------AGPYIPWLLGIIMFGMGLTLKPSIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSI-------VKMVLLPIVLGLIVHKVLGSKTEKLTD-------ALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLG--------------FFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVVA--------VPGALF----------SVWHNISGSLLATYWAAKA--------------------------------
3	PROSPECT2	1ejlI	0.093	0.926	1.737	threading_3	GTVN------------WSVEDIVKGLESQLQATQAARKLLSIDNIIRAGL---IPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGSAFRDLVIKHGAIDPLLALCGYLRNLTWTLSNLCRNKNPAPPPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVVKLLGATELPIVTPALRAQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGI-------IEPLMNLLSAKDT------KIIQVILDAISN-IFQAAEKLGETEKLSIMIEECGGLVYKASLNLIEKYFS
4	PROSPECT2	1ee4a	0.097	0.919	1.670	threading_4	QE-----------------LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQVVPRLVEEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGTDYRDYVLQCNAMEPILGLSLIRTATWTLSNLCRGKKPQPDWPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDELLSHESTLVQTPALRAQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLIIRYLVSQGC---------IKPLCDLLEIADN------RIIEVTLDALILKMGEADKEALNINENADFIEKAGGMEKIFNCNDKIYEKA
5	PROSPECT2	3a6pA1	0.093	0.957	1.669	threading_5	AMDQDPNSTQAEKTQVAIVRHFGLQILEHVEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHIT-------AENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCA----------LGNQLCALLGADSDVETPSNFGKYLESFLAFTSTQMTWGALFRHEILSRDPLLLAIIPKYLLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACTSFQMAGEWLKYQTF
6	PROSPECT2	1xm9A	0.110	0.924	1.638	threading_6	GLTSSQDEKYCFQDESAKQQVYQLGGICKLVDLVQQAAAGALRNLVFRS----TTNKLETRRQNGIREAVLTGLLWNLSSTDELKEIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYV-------------------QNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNMSSGMSQLIGLKE----KGLPQIARLLQSGNSDVVRSGASLLSNMSMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL---LLSDMWSSKELQGVL
7	MUSTER	2fozA	0.143	0.819	0.836	threading_7	----------------------MASLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLTDDTAMARALVQSLLAEAFD-----EVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLN-DVFEPARAQFNGKGSY--GNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHAS----SLGYNGAILQALAVHLALQ--------GESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTR----------EEVVSELGNGI-------AAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDT--IATMAGAIAGAYY---------MDQVPESWQQSCYEETDILAQSLHRVFQKS-
8	SPARKS	1pw4a	0.122	0.916	0.966	threading_8	FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYFALAMPYLVEQGFFIMGSVSDRPRVFLPAGLILAAAVMLFMGFVPWATCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNAHNVGGGIPPLLFLLGMAWFYMPAFCAILVALFAFAMMEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDFRGNRGATGVFFMTLVTIATIV--------YWMNPGNPTVDMI----------CMIVIGFLIYGPVMLIGLHALELAPKKA---------AGTAAG---FTGLFGYLGGSVAASAIVGYT---VDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR
9	PROSPECT2	1gw5b	0.087	0.990	1.557	threading_9	SKYFTTNKKGEIFELNNEKKEKRKEAVKKVIAAMTVSLFPDVVNCMQTDNLELKKLVYLYLMNYAPDMAIMAVNSFVKDCEDPNPLIRALAVRTYLCEPLRKCLKDEDPYVRKTAAVCVAKLDQGFLDSLRDLIADSNPMVVANAVAALSEI----SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLDREAQSICERVTPRLSHANSAVVLSAVKVLMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKLEKLDIRLASQANIAQVLAELKEYAFVRKAVRAIGRCAIKVEQKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLARAAMIWIVGEYAERDNADELLESFLTLLTAIVKLFLKKPS
10	PPA-I	1kpkA	0.083	0.916	0.942	threading_10	GVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRVLPVKFFGGLGTLGGG---MVEGPTVQIGGNIGRMVLDIFRLKTLLATGAAAGLAAAFNPLAGILFIRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVG-KLSDAPLNTLW-LYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGNFSMGMLVFIFVARVIT---------------TLLCFSSGAPGGIF-APMLALGTVLGTAFGMVAVELFPQYHLEAGT-FAIAGMGALLAASIRMTDNYQLILPMIITGLGATLLA---QFTGGKPLYSAILARTLAKQEAEL--------

Predicted Tertiary Structure


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TM-score=0.805 to 1pw4A SCOP code=f.38.1.1	TM-score=0.673 to 1xm9A SCOP code=a.118.1.24	TM-score=0.396 to 1wu3I SCOP code=a.26.1.3	TM-score=0.530 to 2q6hA SCOP code=f.54.1.1	TM-score=0.732 to 1ialA SCOP code=a.118.1.1