Template-based Modeling Results for XYLR_ECOLI


  Submitted Primary Sequence

>Length 392
MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
55333220000020221101100200020023231200000232131102103322010000002133012002403010000102122222123010000102100100030023210110000012322232102200210120024241301112012212311220021012023313321000001111012002002213131122000000122200210021001101200221011002001311222211122112111211122112231222200120020014101420202100310100311013101321321021001011021012113222120220022011211310010014124101320232124224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
1MUSTER3hcwA0.1730.6911.477threading_1-TNQTYKIGLVLKGSNPFYINVLLGISETCNQHGYGTQTTVSDLMDEVYKMIKQRMVDAFILLYSKEPIKQMLIDESMPFIVIGKPTS--DIDHQFTHIDNDNILASENLTRHVIEQGVDELIFITEKGN--FEVSKDRIQGFETVASQFNLDYQIIETSN-EREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIA-SPPQTCIDIKPRMLGQQAGSAILNILKNDVI--ELVIIDT-ELKIRKSTQREG---------------------------------------------------------------------------------------------------------------
2SAM-T992k9sA0.2720.2632.172threading_2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRA-------
3PROSPECT23gbgA0.1150.6631.815threading_3--KKSFQTNVYRMSKFDT------------------YIFNNL------------YINDYKMFWIDS----------GIAKLIDKNCLVSYEINSSSIILLKKN--------------SIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHN----DIAVLSEVVNGFREIN---YSDEFLKVFFSGFFSKVEKKYNSI------------------------------------------------------------------FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTG--V
4SPARKS3miza0.1920.6762.646threading_4---RSNTFGIITDSTTPYSVDIVRGIQDWANANGKTILIANTGGSEVEIWKFQSHRIDGVLYVTYRRIVDPESGDVSIPTVINCRPQTR----ELLPSIEPDDYQGARDLTRYLLERGHRRIGYIRLNPI--LLGAELRLDAFRRTTSEFGLTENSISLGDGPVGAENNYVFAAATELKQDDRPTAISGNDEAIQIYIAAA---LGLRIPQDVSIVGFDDFRTVTAL-KPELTTAALPYYDLGREGAKWLNDLIAGEKIYPGSRVVSC-KLVERSSAAF-----------------------------------------------------------------------------------------------------------------
5PROSPECT21jyea0.1290.6511.820threading_5L-----LIGVATSLALHAPSQIVAAILSRADQLGASVVVSMVERCKTAVHNLLAQRVSGLIINYPLDAIAVEAACTNVPALFLDVSDQ-----TPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSS--VSARLRLAGWHKYLTRNQIQPIAE---REGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDT------------------------------------------------------------------------------------EDSSCYIPP-------------------------------LTTIKQDFRLLGQTS-------VDRLLQLSQGQAVKGNQLLPVSLVK
6PPA-I3c3kB0.1770.6791.707threading_6---KTGMLLVMVNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDRSCLTLLSGKMVDGVITMDALSELELQNIIGAFPWVQCAEYD----PLSTVSSVSIDDVAASEYVVDQLVKSGKKRIALINHDLA--YQYAQHRESGYLNRLKFHGLDYSRI--SYAENLDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDGVDISQ-ITVPALTTVQQPSEQIGMKAVSLLLEQIHSDVLAKTVHHLLPWKFVRRQSSE------------------------------------------------------------------------------------------------------------------
7HHPRED-l2fep_A0.1840.6791.987threading_7----TTTVGVIIDISSIFYSELARGIEDIATMYKYNIILSNSDNELHLLNTMLGKQVDGIVFMNITDEHVAEFKRSPVPIVLAASVE----EQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPI-NRSKKLQGYKRALEEANLPFNEQ-FVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRL-SLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELP-HRIELRKSTK------------------------------------------------------------------------------------------------------------------
8HHPRED-g3egc_A0.1460.6481.698threading_8---RSNVVGLIVSIENVFFAEVASGVESEARHKGYSVLLANTAEEREAVGQFFERRVDGLILAPSEHDYLRTELPKTFPIVAVNREL----RIPGCGAVLSENVRGARTAVEYLIARGHTRIGAIVGSAG--LMTSRERLKGFRAAMSAAGLPVRQ-EWIAA------NGRDGAIKVLTG-DRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLD-PPLPVVEQPTRRIGQEAMRMLIHMIEGTGNAT-EMRLQT-RFVTH----------------------------------------------------------------------------------------------------------------------
9SP33miza0.1920.6762.840threading_9---RSNTFGIITDSTTPYSVDIVRGIQDWANANGKTILIANTGGSEVEIWKFQSHRIDGVLYVTYRRIVDPESGDVSIPTVINCRPQTR----ELLPSIEPDDYQGARDLTRYLLERGHRRIGYIRLNPI--LLGAELRLDAFRRTTSEFGLTELSISLGDGPVGAENNYVFAAATELKQDDRPTAISGNDEAIQIYIAAA---LGLRIPQDVSIVGFDDFRTVTAL-KPELTTAALPYYDLGREGAKWLNDLIAGEKIYPGSRVVSC-KLVERSSAAF-----------------------------------------------------------------------------------------------------------------
10MUSTER2o20B0.1800.6791.466threading_10ASKRTTTVGVILTITSTYFAAITRGVDDIASMYKYNMILANVEKEEKVLETFLSKQVDGIVYMGSDEKIRTSLKNSRTPVVLVGTID----GDKEIPSVNIDYHLAAYQSTKKLIDSGNKKIAYIMGSLK--DVENTERMVGYQEALLEANIEFD--NLVFEGNYSYEQGKALAERLLER--GATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYT-YPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLVLDH-EIFSRRSTK------------------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.706 to 1bykA
SCOP code=c.93.1.1
TM-score=0.468 to 1d5yA
SCOP code=a.4.1.8
TM-score=0.712 to 1bykA
SCOP code=c.93.1.1
TM-score=0.442 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.704 to 1bykA
SCOP code=c.93.1.1