Template-based Modeling Results for YADH_ECOLI


  Submitted Primary Sequence

>Length 256
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
4311100001000021012002200210000001000000000100011013132121010000000000000100110000000121231011001010111000001000000200000000000000011020200000000000000000000100001032220011000000000000000001121012001000200000000000000001122020000000000000000000000033232244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS
1SPARKS3nc3a0.1020.7661.059threading_1MRAKRRIVVRSFIGDALDHL-SPLIKQNAENLLAPY-----------LERGKSDLVNDFGKTFAVCVTMDMLGLDKRD------HEKISEWHSGVADFSQSPEARAHSLWCSEQLSQYLMPVIKELISILCTALSDKDILALILNVLLAATEPADKTLALMIYHNNPEQMNDVLA--------------DRSLVPRAIAETLRYKPPVQLI--PRQL---SQDTVVG-----------------------GMEIKK
2PROSPECT23a0oA30.0630.9921.431threading_2LNSEQLSAFADAVHCGWAEFYETLWRQMYIDCQEVIYAIRHLAIAAAWDTKGATSRAYNDEAGFRVVVALAWGEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALDEAGEWLDYTVEFLATPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYN--YGWWDLNFDDLVYRHDYPQVEAVS
3PPA-I1pw4A20.1300.8091.094threading_3-------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLK--EVKHFA--LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG--------------------NRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------------------GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
4PROSPECT22bkuB20.1110.9841.396threading_4TVAETSASISTFVMDKLGQTMAQSLQELQSNILTVLAAVIVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQVDSPVSITAVGFIADISNSLFRRYSDAMMNVLAQMIELKPAVLSVFGDIASNIGADFIPYLNDIMNGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFYVGTIFQFIAQVAEDPQLY---SEDATSRAAVGLIGDIAAMFDWVIDYIKRTRSGQL
5PPA-I3zuxA0.1600.9531.057threading_5---NILSKISSFIGKTFSLWAALFAAAAFFPYIPWLLGIIMFGMGLTLKPSDF----DILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNGVILVGCCPGGTASNVMTYLARGVALSVAVTSVSTLTSPLLTPALEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSLPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPPVVAVPGALFSVWHNISGSLLATYWAAKA-----
6PROSPECT21r2fA0.0570.9571.363threading_6ISAINWDKDLEVWNRAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLTKEVDAAYAWSEENP---PLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIR---DEAVHGYYIGYKYQIALQK---LSAIEREELKLFALDL--LMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPLSP
7PROSPECT23kb9A0.0560.9691.326threading_7QLHPYWPKLQETTRTWLLEKRLMPADKVEEYADGLCYTDLMA------GYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVAGAWRRLRGLLHTALDSPYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNRRRVEECITEFLAV--ERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFSTPPYVNN
8PROSPECT21ee4a0.0840.9731.317threading_8PEMLQLEAAWALTNPLFIQLLYTGSVEVKEQAIWALGNVTWTLSNLCRGKKPQPDWSVVSQALPTLAKLETLVDACWEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLE-------IADNRIIEVTLDALENILKMGEADKEARGLNINE
9MUSTER3zuxA0.1370.9960.922threading_9ILSGKTFSLWAALFAAAAFFAPDTF-KWAGPYIPWLLGIIMFGMGLTLKPSDFDILPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLAGNVALSVAVTSVSTLTSPLLTPAIFLQAAGMLMSIVKMVLLPIVLGLIVHKVLGSLPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDNSGLAAALAAAHFVPGALFSVWHNISGWAAKA
10SPARKS3e5ja0.1830.7890.866threading_10QDEPEHTSDRKLLAKEFVRRMQALRPNIQRIVDEHLDAIEARG-------GPVDLVKTFANAVPSMVISDLFGVPVER------RAEFQDIAEAMMRVDQDAATEAAGMRLGGLLYQLVQERRADLISALIGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALDSPDQLALLRE--------------DPSLVGNAVEELLRYLTIGQFG-GERVA---TRDVEL-----------------------GGVRIAK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.437 to 1j30A
SCOP code=a.25.1.1
TM-score=0.560 to 1cptA
SCOP code=a.104.1.1
TM-score=0.579 to 1j0nA
SCOP code=a.102.3.2
TM-score=0.863 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.490 to 2hs5A
SCOP code=a.4.5.6