Template-based Modeling Results for YAFL_ECOLI


  Submitted Primary Sequence

>Length 249
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
CCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCHHHHHHHEEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
552321211100000100111211010111312122112221321131133122224322222231323023113321231043223213132322344232223333222233223102100220032112100111221331000000000001311304012012101223322202232033000000102143200000000020100101422320200201221012100001101344334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
1MUSTER2k1gA0.2970.5142.237threading_1-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQE--MGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSS-GVIISSMNEPYWKKRYNEARRVLSRS--L
2SPARKS2jyxa0.2950.5183.309threading_2-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTGR--HVGIYIGNNQFVHAS-TSSGVIISSMNEPYWKKRYNEARRVLSRSLE-
3PROSPECT23pbiA0.2570.7353.065threading_3GTLPALVS--------AGAPGDPLAVANASLQATAQATQTTLDLGRQFLGG---------------------------------------------LGINLGGPTGASRIPRANARQAVEYVIRRAGSQMGVPYSWGGGSLQGPFDCSGLVRYAFA-GVGVLIPRFSGDQY--NAGRHVPPAEAKRGDLIFY---GPGGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGM---TPFVTRIIEY----
4PPA-I2k1gA0.2950.5182.471threading_4-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTK-KGIDCSGFVQRTFREQFGLELPRSTYEQQE--MGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSS-GVIISSMNEPYWKKRYNEARRVLSRSLE-
5HHPRED-l3h41_A0.2250.8764.755threading_5-------------SAFIATLWTADVPSATNPVDLWKWTKS-TLDEKLWLNKLEQEVTPTAILYINPSEK-HKSLEVYNTRLLSEDTISYRVLLPNGQRKNDGTFYRSQN-DIP--TPAADDLINTGK-FLGLPYIWAGTSG-FGFD-SGFTHTIYKS-HGITIPRDSGPQ--SRNGVAVDKEHLQKGDLIFFAHDGKGSVHHVA-YIGDGN-IHSPRAERSVEIIPLNTPGYIEEYAGARRYLP-----
6HHPRED-g2hbw_A0.2360.8154.262threading_6-------------------------------GEYQCLAALNLYDSPEC-TSLATQAAVGRHLQVTSNQQAAVEVCLCDDYPGWLSLGDLGLLKPATVL-YQAKS-----FSESEIKKLLPIAFTQKA-QQSNYYLWGGTVG-PNYDCSGL-QAAFVS-VGIWLPRDAYQQEAF--TQAITIDELAPGDLVFFGTP--VKATHVGLYLGDGCYIHSSGKADGIGIDILSEQSYYQQLRGAGRVVKSYKPQ
7SP32k1ga0.2870.5182.967threading_7-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSSG-VIISSMNEPYWKKRYNEARRVL-SRSLE
8SAM-T992k1gA0.3220.4864.834threading_8--------------------------------------------------------------------------------------------------------------------DVKSRIMDQYADWKGVRYRLGGSTK-KGIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTG--RHVGIYIGNNQFVHA-STSSGVIISSMNEPYWKKRYNEARRVL------
9MUSTER3pbiA0.2620.7352.122threading_9PTLPALVS--------AGAPGDPLAVANASLQATAQATQTTLDLGRQFLGGLG---------------------------------------------INLGGPTGASRIPRANARQAVEYVIRRAGSQMGVPYSWGGGSLQGGFDCSGLVRYAFAGV-GVLIPRFSGDQYN--AGRHVPPAEAKRGDLIFYGP---GGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGMTP---FVTRIIEY----
10SPARKS2k1ga0.2950.5183.305threading_10-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTG--RHVGIYIGNNQFVHAS-TSSGVIISSMNEPYWKKRYNEARRVLSRSLE-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.438 to 2iobB
SCOP code=c.30.1.7
TM-score=0.423 to 2im9A
SCOP code=d.3.1.13
TM-score=0.442 to 2iobB
SCOP code=c.30.1.7
TM-score=0.422 to 2im9A
SCOP code=d.3.1.13
TM-score=0.443 to 2iobB
SCOP code=c.30.1.7