Template-based Modeling Results for YAFV_ECOLI


  Submitted Primary Sequence

>Length 256
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCEECCCCCCEEEECCCEEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCEEECEEEEECCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHCCHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
5531100000000222212100310130022123210000010010111132002213233002001210440200000000132331000000001220100100010004023132101113220002041010000000001001001202501000000111122120000000000121200000003002223201000000000020100020324322100020012002201430101212131423
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
1MUSTER2e11A0.4780.9963.795threading_1MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIRE-QEQVVTTTISAAALAEHRARFPAMLDGDSFVLG
2SPARKS3p8ka0.3210.9735.678threading_2RGSHKVQIYQLPIVFGDSSKNETQITQWFEKNAEVDVVVLPE-WNNGYDLEHLNEKADLGQSFSFIKHLAEKYKVDIAGSVSNIRNNQIFNTAFSVNKSGLINEYDKVHLVPL-REHEFLTAGEYVAFQLSDGTYVTQLICYDLRFPELLRYPAGAKIAFYVAQWP-SRLQHWHSLLKARAIENN-FVIGTNSTGFDG-NTEYAGHSIVINPNGDLVGELNES-ADILTVDLNLNEVEQQRENIPVFKSIK-LDLY
3PROSPECT22e11A0.4750.9965.001threading_3MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEMDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQE-QVVTTTISAAALAEHRARFPAMLDGDSFVLG
4PPA-I2e11A0.4750.9966.649threading_4MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQ-EQVVTTTISAAALAEHRARFPAMLDGDSFVLG
5HHPRED-l2e11_A0.4800.9924.310threading_5MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLGQSDLVILPETFTSGFSNEAIDKEDMDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVL-
6HHPRED-g1ems_A0.2380.9843.586threading_6MATHFIAVCQMTS-DNDLEKNFQAAKNMIERAGKCEMVFLPECFDFIGLNKNEAMAT-DCEYMEKYRELARKHNILSLGGLHHKDAAHPWNTHLIIDSDGVRAEYNKLHLFDLEMESFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWKRGAQLLSFPSAFTNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSER-VDMCFAEIDLSYVDTLREMQPVFSHRRS-DLY
7SP33p8ka0.3210.9735.884threading_7RGSHKVQIYQLPIVFGDSSKNETQITQWFEKNAEVDVVVLPE-WNNGYDLEHLNEKADLGQSFSFIKHLAEKYKVDIAGSVSNIRNNQIFNTAFSVNKSGLINEYDKVHLVPL-REHEFLTAGEYVAFQLSDGTYVTQLICYDLRFPELLRYPAGAKIAFYVAQWP-SRLQHWHSLLKARAIENN-FVIGTNSTGFDG-NTEYAGHSIVINPNGDLVGELNES-ADILTVDLNLNEVEQQRENIPVFKSIK-LDLY
8SAM-T992w1vA0.2060.9884.469threading_8MSTFRLALIQLQV-SSIKSDNLTRACSLVREAQGANIVSLPECFNSPYGTTPDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEEAGKLYNTCSVFGPDGLLVKHRKIHLFDIFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYRGCQLLVYPGAFNLTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG-TEETILYSDIDLKKLAEIRQQIPILKQKRADLY-
9MUSTER2w1vA0.2210.9883.512threading_9MSTFRLALIQLQVS-SIKSDNLTRACSLVREAAGANIVSLPECFNSPYGTTYFPDYAEPGESTQKLSEVAKESSYLIGGSIPEEDAGKLYNTCSVFGPDGLLVKHRKIHLFDIDQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYRGCQLLVYPGAFNLTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG-TEETILYSDIDLKKLAEIRQQIPILKQKRA-DLY
10SPARKS2e11a0.4750.9965.075threading_10MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQ-EQVVTTTISAAALAEHRARFPAMLDGDSFVLG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.881 to 1f89A
SCOP code=d.160.1.1
TM-score=0.881 to 1f89A
SCOP code=d.160.1.1
TM-score=0.883 to 1j31A
SCOP code=d.160.1.2
TM-score=0.880 to 1f89A
SCOP code=d.160.1.1
TM-score=0.881 to 1f89A
SCOP code=d.160.1.1