Template-based Modeling Results for YAGA_ECOLI


  Submitted Primary Sequence

>Length 384
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCEEEEECHHHCCCEEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC
543211232312121112001102432020210042020102001200210233122212332322332234223200200220123133100220020013222221112100100132212222222232223132311220000002000012101000000001111100000012424230012001000231111110001112211322000100120034110200102222122201012002101211221321220210120022012111131013002210001112211331113223231330100120232020102100010021022120101213331201001120200001134432322432
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC
1MUSTER1bcmA0.1630.6220.888threading_1---------------------------------------------------------------------------------------------------------------------------------------VEHLDAMQWINGDGY-VRWFNGDVIKTWFWQDVKTRKILGWRCDVSENIDSIRLSFMDVVTRYGIPEHITIDNTRGAANKWLTGGAPKGLFLLMGAKMHWTSVVAGKGWGQAERAFGVGGLEVDKHPALADAELFLKTLAEGVAMFNARTGRET-GKLSFDDVFEREYARTIVRKPTEEQKRMLEAVNVSRKGEFTLKAKNVYYNMALMVKKVVVRFDPQQ-------LHSTVYCYTLDGRFICEAE-C
2SPARKS3oy9a0.1300.8202.035threading_2---------------------------------------LDAELDQLLQGHYIKGYPKQYTKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIA-NLYWWPNRKDVVKQLGRCQTNASNKASGPILRPDRPQKPFDKFFIDYIGPPPSQGYL-YVLVVVDGMTGFTWLYPT-KAPSTSATVKSLNVLTSI-AIPKVIHSDQGAAFT-----SSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLV-GRPTKWYDLLPVVQLALNNT-YSPVLK-YTPHQLLFGIDSNTPFAN--------------QDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQ----LVQERVARPASLRPR
3PROSPECT23hosA0.1420.7342.068threading_3----VPNK-----EQTRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYE------DAELQALLDEDDAQTQKQLA------EQLEVSQQAVSNRLREMGKIQKVGRWVPHELNKRKSFLHRIVTGDEKWIFFRFGKKTMLCVWWDQSGVIYYELLKPGTVNAARYQQQLINLNRAPEYRVIFLHDNAPSHTA-----RAVRDTLETLNWEVLPHAAYSPDLAP-SDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGI--HKLPERWEKCVASDGKYFE-------------------------------------------------------------------------
4PPA-I3hotA0.1240.7341.511threading_4---------VPNKEQTRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYE------DAELQALLDEDDAQTQKQLAEQL------EVSQQAVSNRLREMGKIQKVGRWVPHELNEKSFLHRIVTGDEKWIFPNRFGKKTMLCVWWDQSGVIYYELLPGETVNAARYQQQLINLNRALQHRVIFLHDNAPSHTA-----RAVRDTLETLNWEVLPHAAYSPDLA-PSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGIHKLPERWEKCVASDGKYFE---------------------------------------------------------------------------
5HHPRED-l1bco_A0.1350.6172.715threading_5----------------------------------------------------------------------------------------------------------------------------------------EHLDAMQWINGDGYLHFNGDVIRPKTWFWQDVKTRKILGWRCDVSENIDSIRLSFMDVVTRYGIPEDITIDNTRGAANKWLKEDDPKGLFLLMGAKMHWTSVVAGKGWGQVERAFGVGGLEEYVGDRAVDAELFLKTLAEGVAMFN-ARTGRETGKLSFDDVFEREYARTIVKPTEEQLLLPAEAVNVSRKGELKGAKNVYYNMANAGVKKVVVRFDPQQSTVYCYTDGRFICEAECL----------
6HHPRED-g1c6v_A0.1420.3853.032threading_6------------------------------------------------------------------------------------------------------------------------------------------NSDLGTWQMDCTHL---EG-K-IVIVAVHVASGFIEA-EVIPQETGRQTALFLLKLAGRWPIT-HLHTDNGANFAS-----QEVKMVAWWAGIEHTFG-----------EAMNHHLKNQIDRI--REQANSVETIVLMAVHCMNH-KRRGGIGDMTPAERLINMITTEQE----IQFQ--------------------------------------------------------------------
7SP33os0a0.1300.8622.095threading_7----------------AELDQLLQGHYIK--------GYPKQYTYFLKVKV-------SRPEGVKII-----PPQSDRQKIVLQAHNLAHTGREATLLKIA-NLYWWPNMRKDVVKQLGRITNASNKASGPILRPDRPQKPFDKFFIDYIGPPPSQGYL-YVLVVVDGMTGFTWLYPT-KAPSTSATVKSLNVLT-SIAIPKVIHSDQGAAFT-----SSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLT-KLLVGRPTKWYDLLPVVQLALNNT-YSPVLK-YTPHQLLFGIDSNTPFANQLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVGQLVQER-VARPATVLKVLNPRTVVILDHLGNNRT----V
8SAM-T993l2rA0.1700.4902.734threading_8-------------------------------------------------------------KVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKPILRPDRPKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFT-WLYPTKAPSTSATVKSLNVLTSIA-IPKVIHSDQGAAFTSS-----TFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKR--------------------------------------------------------------------------------------------------------------------------------
9MUSTER3hotA0.1560.7340.877threading_9----VPNK----EQTRTVLIFCFHL-KKTAAESHRMLVPTVKTCERWFQRFKSGDFDVDDKEHGKPPKRYE------DAELQALLDEDDAQTQKQLAEQLE------VSQQAVSNRLREMGKIQKVGRWVPHELNERQSFLHRIVTGDEKWIFFVNGKKTMLCVWWDQSGVIYYELLKPETVNAARYQQQLINLNRALQRPEIFLHDNAPSHTA-----RAVRDTLETLNWEVLPHAAYSPDLA-PSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGI--HKLPERWEKCVASDGKYFE-------------------------------------------------------------------------
10SPARKS3os0a0.1260.8052.013threading_10---------------------------------------------AELDQLLQGHYIKGYPKQYRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIA-NLYWWPNRKDVVKQLGRCQTNASNKASGPILRPDRPQKPFDKFFIDYIGPPPSQGYL-YVLVVVDGMTGFTWLYPT-KAPSTSATVKSLNVL-TSIAIPKVIHSDQGAAFT-----SSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLV-GRPTKWYDLLPVVQLALNNT-YSPVLK-YTPHQLLFGIDSNTPFAN--------------QDTLDLTREEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQ----LVQERVARPASLRPR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.633 to 1bcmA
SCOP code=b.48.1.1
TM-score=0.469 to 1c0mC
SCOP code=b.34.7.1
TM-score=0.607 to 1c0mC
SCOP code=b.34.7.1
TM-score=0.489 to 1c0mC
SCOP code=b.34.7.1
TM-score=0.487 to 1c0mC
SCOP code=b.34.7.1