Template-based Modeling Results for YAJG_ECOLI

Submitted Primary Sequence

>Length 192
MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEHHHEEEECCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR
431310100000000010122221010103122233232221010001011233320002013332102010233121102200231033211201231211020101101020333103110202010100020342321011020212120113121310120022002200220031220221033225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR
1	MUSTER	2iqiF	0.091	0.854	1.155	threading_1	---------------------ATIYAPTVRVTPNPAWPQV-SWQLLVSAARIIDSPRINVRPTPGELQVYH-AQPATDMLEDSVVRAFEDSGVARIIRSDYKLAIDVRRFESDYAGQS---LPAATIELNAKLLHSSDQRVVASRTFTVARPSS-STDTAAVAAAFEQALTQVTTELVG-WTLITGQQDSQT
2	SPARKS	2iqia	0.104	0.849	1.146	threading_2	-----------------------ATIYAPTVRV-TPNPAWPQVSWQLLVAKPSDSPRINVRPTPGELQVYHGAQPATDMLEDSVVRAFEDSGKAVARISDYKLAIDVRRFESDYAGQS---LPAATIELNAKLLHSSDQRVVASRTFTVARPSS-STDTAAVAAAFEQALTQVTTELVG-WTLITGQQDSQT
3	PROSPECT2	2iqiA	0.098	0.854	1.492	threading_3	---------------------ATIYAPTVRVTPNPAWPQVSW-QLLVAKPSAARSPRINVRPTPGELQVYHGAQPATDMLEDSVVRAFEDSGKAVARISDYKLAIDVRRFESDYAGQS---LPAATIELNAKLLHSSDQRVVASRTFTVARPSS-STDTAAVAAAFEQALTQVTTELVG--WTLITGQQDSQ
4	PPA-I	2iqiF	0.103	0.859	1.890	threading_4	----------------------ATIYAPTVRVTPNPAWPQVSWQLLVSAARIIDSPRINVRPTPGELQVYHGAQPATDMLEDSVVRAFEDSGKARIIRSDYKLAIDVRRFESDYAGQS---LPAATIELNAKLLHSSDQRVVASRTFTVARPSS-STDTAAVAAAFEQALTQVTTELVGWTLITGQQDSQT-
5	HHPRED-l	2iqi_A	0.096	0.812	1.141	threading_5	----------------------ATYAPTVRVTPNPA---WPQVSWQLLVAKPSDSPRINVRPTPGELQVYHWAQPATDMLEDSVVRAFEDSGKIAA--SDYKLAIDVRRFESDYAGQ-SLPA--ATIELNAKLLHSSDQRASRTFTVARP---SSSTDTAAVAAAFEQALTQVTTELVG--WTLITGQQDS-
6	HHPRED-g	2iqi_A	0.114	0.823	1.507	threading_6	----------------------ATYAPTVRVTPNPAWP---QVSWQLLVAKPSDSPRINVRPTPGELQVYHWAQPATDMLEDSVVRAFEDSGKIVA--SDYKLAIDVRRFESDYA-GQSLPAATIELNAKLL-HSSDQRVASRTFTVARP---SSSTDTAAVAAAFEQALTQVTTELVG--WTLITGQQDSQ
7	SP3	2iqia	0.117	0.849	0.598	threading_7	-----------------------ATIYAPTVRV-TPNPAWPQVSWQLLVAKPSAAPRINVRPTPGELQVYHGAQPATDMLEDSVVRAFEDSGKAVARISDYKLAIDVRRFESDYAGQSL---PAATIELNAKLLHSSDQRVVASRTFTVARP-SSSTDTAAVAAAFEQALTQVTTELVGWTLITGQQDSQT-
8	SAM-T99	1e19A3	0.146	0.536	1.046	threading_8	KVVTIITQTIVD---------------DPAFQNPTKP-VGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVIL----------------------------EDGE-------------------IKGVEAVI--------------------------
9	MUSTER	3e8wA	0.133	0.943	0.699	threading_9	DSACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDLSGLQFTLKEGKLKKGAVIDNVKWDLKKKNIE----VDFHLDATVKGHYTAGGLILPITGDGQMKLKLKNIHIHL---VVSYEMEKD-VDHVIFKKYT--TFDVKDNAQFGLTNLFNGN-KELSDTMLTFLNQNWKQVSEEKPVMEAAAKKIF
10	SPARKS	3bgha	0.090	0.807	0.734	threading_10	----------------------VELHFHYPIKGKQEPKNSHLVVLKIEINKVIPESYQ---------------KEFEKSLFLQLSSFLERKGYSVSQKDASEIPQDIKEILEDIALSEEKVIDMSSGYLNLNFVEPKSEDIIHSFGIKAVIERVKETDDQAIRKIMNQAYHKVMVHITKEKHMEHYEKVSSE

Predicted Tertiary Structure


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TM-score=0.860 to 2iqiF SCOP code=c.51.6.2	TM-score=0.849 to 2iqiF SCOP code=c.51.6.2	TM-score=0.857 to 2iqiF SCOP code=c.51.6.2	TM-score=0.865 to 2iqiF SCOP code=c.51.6.2	TM-score=0.837 to 2iqiF SCOP code=c.51.6.2