Template-based Modeling Results for YBCN_ECOLI

Submitted Primary Sequence

>Length 151
MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
CCCCCCCCEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
5423321121030102100200220043130020102224342311110100000010020013322211122101200321101012220132221211101113312312111011001101100131102000131031221334335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
1	MUSTER	1pc6A	0.129	0.921	2.058	threading_1	MK--KLTFEISPAHQQNAIHAVQQIPDPTKPIVVTIQE--RNRSLDQNRKLWACLGDVSRQVEWHGRWL-DAESWKCVFTAALKQQDVVPNLAGNG----FVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
2	SPARKS	1pc6a	0.130	0.914	1.630	threading_2	--MKKLTFEI-RSHQQNAIHAVQQIPDPTKPIVVTIQE--RNRSLDQNRKLWACLGDVSRQVEWHGRWL-DAESWKCVFTAALKQQDVVPNLAGNG----FVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
3	PROSPECT2	1pc6A	0.135	0.934	1.128	threading_3	M--KKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRW-LDAESWKCVFTAALKQQDVVPNLAGNG----FVVIGQSTSRMRVGEFAELLELIQAFGTERGVK---WSDEARLALEWKARW
4	PPA-I	1pc6A	0.113	0.934	3.188	threading_4	--MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWL-DAESWKCVFTAALKQQDVVPNLAGNG----FVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
5	HHPRED-l	1pc6_A	0.164	0.927	8.219	threading_5	MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQER--NRSLDQNRKLWACLGDVSRQVEWHGRWLDAESW-KCVFTAALKQQDV-----VPNLAGNFVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
6	HHPRED-g	1pc6_A	0.150	0.927	7.406	threading_6	MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQE--RNRSLDQNRKLWACLGDVSRQVEWHGRWLD-AESWKCVFTAALKQQDVV-----PNLAGGFVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
7	SP3	1pc6a	0.122	0.921	1.007	threading_7	--MKKLTFEISPAHQQNAIHAVQQIPDPTKPIVVTIQE--RNRSLDQNRKLWACLGDVSRQVEWHGRWLD-AESWKCVFTAALKQQDVVPNLAGNG----FVVIGQSTSRMRVGEFAELLELIQAFGTERGVKWSDEARLALEWKARW---
8	SAM-T99	1pc6A	0.163	0.934	2.485	threading_8	MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTI--QERNRSLDQNRKLWACLGDVSRQVEWHGRWL-DAESWKCVFTAALKQQDVVPNLAG----NGFVVIGQSTSRMRVGEFAELLELIQAFGTERGVKW---SDEARLALEWKARW
9	MUSTER	1xf8A2	0.113	0.940	0.697	threading_9	LTKFPDAKTTLDLYPSKTKSKIKRPFRDG----VEVHS----NSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGLKYGRKIWFMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDSESTDDSLYVFKH-A
10	SPARKS	3ec2a	0.154	0.947	0.616	threading_10	WNANLDTYHPKNVSQNRALLTIRVFVHNEEGKGLTF---VGSPGVGKTHLAVATLKAIYEK---KGIRFFDTKDLIFRLKHLDEGKDTKFLKTVLNSPVLVLDDL-GSERLS-DWQRELISYIITYRYNNLKSTIITTNYSLQRSSVRISA

Predicted Tertiary Structure


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TM-score=0.744 to 1pc6A SCOP code=d.262.1.1	TM-score=0.748 to 1pc6A SCOP code=d.262.1.1	TM-score=0.758 to 1pc6A SCOP code=d.262.1.1	TM-score=0.678 to 1pc6A SCOP code=d.262.1.1	TM-score=0.763 to 1pc6A SCOP code=d.262.1.1