Template-based Modeling Results for YBCY_ECOLI

Submitted Primary Sequence

>Length 194
MGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
CCCCCCCEECCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCEEEEEEECCCEECCCCHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
44210210120211310021023221310000000100002201320100000013200200032024242211000001231122131200000001000001122211210021003003330000000000321211000110020013211112242113100300333132020201000000202256
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK
1	MUSTER	3hnrA	0.155	0.933	1.902	threading_1	IQYKEVF----AHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLGRTVYGIEPSREMRMIAKEKLP-KEFS--ITEGDFLSFEV--PTSIDTIVSTYAFHHLTD--DEKNVAIAKYSQLLNKGGKIVFADTIFADQD--AYDKTVEAAKQRGFLQTEYYTRIPVMQTIFENNFHVTFTRLNHFVWVMEATKQL
2	SPARKS	1vl5a	0.119	0.907	1.922	threading_2	-----------GSDLAKLQIAALKGNEEVLDVATGGGHVANAFAPFKKVVAFDLTEDILKVARAFIEGNGHQQ-VEYVQGDAEQPFTDERFHIVTCRIAAHHFP----NPASFVSEAYRVLKKGGQLLLVDN--SAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKLEEAGFELEELHCFHKTFIFEDWCDR
3	PROSPECT2	3hnrA	0.160	0.933	1.971	threading_3	DIQYKEV---FAHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLAGRTVYGIEPSREMRMIAKEKLPKEFSIT-----EGDFLSFEVPTSIDTIVSTYAFHHLT--DDEKNVAIAKYSQLLNKGGKIVFADTIFAD---QDAYDKTVEAAKQRGFQTEYYTRIPVMQTIFENNFHVTFTRLNHFVWVMEATEHH
4	PPA-I	3hnrA	0.166	0.933	2.024	threading_4	---DIQYKEVFAHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLGRTVYGIEPSREMRMIAKEKLPKE-----FSITEGDFLSFEVPTSIDTIVSTYAFHHLTD--DEKNVAIAKYSQLLNKGGKIVFADTIFAD---QDAYDKTVEAAKQRGFHQEYYTRIPVMQTIFENNFHVTFTRLNHFVWVMEATKQL
5	HHPRED-l	1vl5_A	0.134	0.887	1.419	threading_5	---------G-SDLAKL-QIAALKGNEEVLDVATGGGHVANAFAPFVKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-PFTDERFHIVTCRIAAHHFP----NPASFVSEAYRVLKKGGQLLLVDNSAPE---NDAFDVFYNYVEKRDYSHHRAWKKSDWLK-LEAGFELEELHCFHKSIL-KARKP-
6	HHPRED-g	3ccf_A	0.175	0.881	1.224	threading_6	--------FVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQGAEVLGTDNAAT-IEKARQNYP----HLHFDVADARNFRV--DKPLDAVFSNA-LHWVK----EPEAAIASIHQALKSGGRFVAEFG-GKGNIKYILE-ALYNALETLGNPQAYFPSIGEYVNILEQGFDVTYAALFNRPTTL-AEGEF
7	SP3	3dtna	0.158	0.948	2.048	threading_7	FIPCFDDFY----GVSVSIASVDTENPDILDLGAGTGLLSAFLMPEATFTLVDMSEKMLEIAKNRF-RGNLKVKYIEADYSKYD--FEEKYDMVVSALSIHHLE--DEDKKELYKRSYSILKESGIFINADLVGETAFIENLNKTIWRQYVENSGLTDKDIEMNQQLNWLKEGFRDVSCIYKYQFAVMFGRKT-
8	SAM-T99	3mggA	0.168	0.799	1.965	threading_8	---------------LLHHDTVYPPGAKVLEAGCGIGAQTVILAPDAEITSIDISPESLEKARENTEKNGIVKFLQANIFS--LPFEDSSFDHIFVCFVLEHLQSPEE----ALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNRVQAYKGNSLVGRQIYPLLQESGFE------------------
9	MUSTER	3dh0B	0.199	0.881	1.737	threading_9	LDDPSRLEL--FDPEKVLKEFGLKEGMTVLDVGTGAGFYLPYLGEKGKVYAIDVQEEMVNYAWEKVNKLGLKVEVLKSEENKIP-LPDNTVDFIFMAFTFHELS----EPLKFLEELKRVAKPFAYLAIIDWKKEERD--------------KGPPPEEVYSEWEVGLILEDGIRVGRVVEVGCFGVYAMIV--
10	SPARKS	3mgga	0.147	0.912	1.894	threading_10	----------ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQ----SPEEALKSLKKVLKPGGTITVIEGDHGSCPEGKKAIEAWNCLIRVQAYKGNSLVGRQIYPLLQEGFEKIRVEPRVYI---DSSKPE

Predicted Tertiary Structure


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TM-score=0.730 to 1im8A SCOP code=c.66.1.14	TM-score=0.727 to 1im8A SCOP code=c.66.1.14	TM-score=0.826 to 1vl5A SCOP code=c.66.1.41	TM-score=0.714 to 1im8A SCOP code=c.66.1.14	TM-score=0.737 to 1im8A SCOP code=c.66.1.14