Template-based Modeling Results for YBIO_ECOLI


  Submitted Primary Sequence

>Length 741
MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL
CCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEEEEEEEEECCCCCEEEEECCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL
441100000000000000120211222222322232123232434411011002102233113200310220132232332332123222333201210120022003100110020032022223421213100200010000000000000001100110021012112333332120021001000110111111010100020001112112211100000000000001001000100001312302102031200100010000000000000000100122312230010000000000000000000201220130023113322111110010002000000000000000000011120020000000100000000000000001013311211230231122013102101110120020000000000001001012111112221022001000100000000000010011001210111132322221112001200210000000000000001201010010000000000000100120030000000000221031010020140201012000000001122111000010100100001431000002010124410310130022002202423323221123020000110241100000001022231120110001101310232303010110100012222323322323344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL
1MUSTER2x1gF0.0820.9411.361threading_1LCISLGAYIVHMLGEEVINTFQNQRSADVQLWPEEAQVIHTSVKRVVLRAEIAKRV--QLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIIEGCVTITAVLLEVVHKCYWPCIHGCMTADENELAESCLKTMVNIIIQYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITDPELSILVHRGIYWYMLQDEVFAKCWEYIKPLYAHLTRILV-EQPDEKSLAKWSCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSV-RQIPRLMRVLAEIPYEKLNLLGTALETMGSYCNWLMYIPPAINLLVRGLNSS-----MSAQATLGLKELCRDCYADPLLNACHA-TGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQATPAARIRTIFRLNMISTLFSSL-VLLVMQRTMPIFKRIAEMWV----EEIDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQCCAPTLEISKTAIVMFFKPLMQQLLREFIQHSFKLFESTPEQN----FSNISDTMETFGCLTQIIKKIPQVLEDKTL-AYDRL------VFYAQRGMTLPESGAIRNSIQFLTHFVMQSRNHAHVTEVVLATGEMMCVGLTPRSQVDKFADI------LLAMNRKYAAEMAVWMKSL------------MSTPNFPTQLITDADKTR
2SPARKS1mxma0.1830.3391.782threading_2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILK------DREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV--------------
3PROSPECT21qgra0.0990.9232.848threading_3MELITILEKTVAAVENLPTFLVELSRVLANPGNSQVATSKDPDIKAQYQQRWLAI--DANARREVKNYVLHTLGTETYRPSVNQWPENPNSTEHMKESTLEAIGYICQDLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTCKAAGVCLMLLATCCEDDIVPHVLPFIKRYRDAAVMAFGCQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAPLLQCLIEGLSAEPRVASNVCWAFSSLAEALRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMSDRIQFNDLQSLLCATLQNVLRKVQHQDAL--QISDVVMASLLRMEDALMAVSTLVEVLGGEFLKYMEAIGLKNYAEYQVCLAAVGLVGDLCRALFCDEVMQLLLENLGNEKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLESCLEAYTGIVQGLKGDQEN----VHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGDVLKLVEARPMIHELLTE----------------------GRRSKTNKAKTLARWATKELRKLKN---------------------------QA
4PPA-I2vv5A0.1900.3412.534threading_4----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK--------IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIGNIINFSRPVRRNEFIIGVAYDSDIDQVKQILTNIIQSE------DRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV--------------
5HHPRED-l2vv5_A0.1900.3418.663threading_5-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L-----SYAVNIVAALAIIIVGLIIARMISNAVNRLMISR--K------IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIINIINFSREVRRNEFIIGVAYDSDIDQVKQILTNIIQSE------DRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV--------------
6HHPRED-g2vv5_A0.1940.3408.055threading_6-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----YAVNIVAALAIIIVGLIIARMISNAVNRLMISR--------KIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIGNIINFSREVRRNEFIIGVAYDSDIDQVKQILTNIIQS-------EDRILKDREMVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV--------------
7SP32xwub0.1100.9780.776threading_7GSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPPQYRKGLVRTSLAVECGAQQPSSPSCVRQKVLVQLEVPLQDCEALIQAAFAALFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVMETSHGICRIAVALGEHSRADQVEHWQSFLALVNMIMFCTVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVY-RPVYFQLVDVLLHKAQFPSDEEY-GFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLS-NLYDKLGRLLTSWQHTEALLYGFQSIADVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLAPVMINSVLPLVLHALGPELSVSSVSTLKKICRECKYDLPAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKL-AEEIPNPSNKLAIVHILGLLSNLFTPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMIPQASALDLTRQLVHIFAPAHFPPIEALFLLVTSVTLTLFQQGDHPDI-----VDSFMQLLAQALKRKP-DLFLCERLDVKAVFQCA------VLALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRMLLLEAIGGQASRSLMDCFADILFALNKFSLLSMWIKEALQPPGFPSARLQKDTFSQQILRERVNKRRVKEMV
8SAM-T992vv5A0.1930.3367.183threading_8------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISR-KIDATVA-------DFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIGNIINFSREPRRNEFIIGVAYDSDIDQVKQILTNIIQS-------EDRILKDREMVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKR---------------
9MUSTER3ea5B0.1070.9501.313threading_9M-EFAQLLENSILSP----------DQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDLEGRILAALTLKNELVSKDSVKTQQFAQTQVSPETNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTQPENVKRASLLALGYMCESADNNILIAIVQGAQSTEAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYFMKPYMEQAL----YALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPSPLQSYNFALSSIKDVVPNLLNLLTRQNSMSAGACLQLFAQNGNHILEPVLEFVEQNWRNREAAVMAFGSIMDGPDKHQALPSILNLM--SLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYAETSASISTFVMDKLGQTMSVDEEDAQSLQELQSNILTVLAAVIRKSPVADMLMGLFFAFIEDDVFYAISALAASLGFEKYLETFSPYLLKALNQVDSIADISDFRRYSDAMMNVLAQMISNPNARRELKP---AVLSVFGDIAS-------NIGADFIPYLNDIMALCVAAQNTKPENGTLEAL--------YQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQ-EDPQLYSEDATSRA-AMFPDGSIKQGQDWV
10SPARKS2xwub0.0980.9351.140threading_10GSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPPQYRKGLVRTSLAVECGAQQPSSPSCVRQKVLVQLEVPLQDCEALIQAAFAELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVMETSHGICRIAVALGEHSRADQVEHWQSFLALVNMIMFCTVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVY-RPVYFQLVDVLLHKAQFPSDEEY--GFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSWQHTEALLYGFQSIADVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLA-------------DHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRELPPYAANIVAVSQDVLSQCMWLMQALGFLLSALQVEEILKNLHSLISPYQLEKLAEEIPNPSNKLAIVHILGLLSNLFTPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGLDLTRQLVHIFAPAHFPPIEALFLLVTSVTLTLFQGPRDHPDIVD--------SFMQLLAQALKRKP-DLFLCERLDVKAVFQC------AVLALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRMLLLEAIGGQ---------ASRSLFADILFALNKHCFSLLSMW--------IKEALQPPGFPSARLSPEQKDT

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.575 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.796 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.506 to 2vv5A
SCOP code=b.38.1.3
TM-score=0.708 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.574 to 2vv5A
SCOP code=b.38.1.3