Template-based Modeling Results for YCCA_ECOLI


  Submitted Primary Sequence

>Length 219
MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
554222223332111101200220010000000000000000001110000000000000000001222223110000000000000000000010001112120000000000000000000001233311110000000000000000011002120010000000000000000000110132032100100010000000000000100122244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
1SPARKS2xwub0.0840.9821.287threading_1KAQLFTQITRFASGKIVLTRLCVALASLALSMAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEV----PLQDCEALIQAAFAALFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQS
2PROSPECT22bkuB20.0970.9911.362threading_2ENQLTLEDAQSLQELQSNMLMGLFFRLLFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMPNARRELKPAVLSVFGDIASNIGADFIPYENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYS--EDATSRAAVGLIGDIAAMFDWVIDYIKRTRSG
3SPARKS2bkub0.1120.9821.175threading_3FAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPE--LMKIMVDNTGAEQPENVKRASLLALGYMCESASNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATIEVQAAAF--GCLCKIMSKYYTFMKPYMALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQS
4PROSPECT21r2fA0.1110.9911.321threading_4ISDKDLEVWNRLTSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSWLPMYFSSRGKLTNTADLIDEAVHGYYIGYKYQIALLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFL--CYNANKALMNLGYEASP
5SPARKS3m1ic0.1051.0001.165threading_5VVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLSTKFMRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESL
6PROSPECT21h0oa0.1191.0001.267threading_6NPSVEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEVADRLMLELGFNKIE
7SPARKS2x1gf0.0830.9911.156threading_7KQKILESIVRFAGGP--KIVLNRLCISLGAYIVHMLGEEVINTFQNQADVQLWIMLEVLTAIPEEAQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHCYWPCIHGCMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVKMFLDSLSEITKTEDIIVHIYMLFVSSVER
8PROSPECT21ezfa0.0731.0001.232threading_8NSLKTCYKYLNQTVEKKVPLLHNFHSFLQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYSVFNFCAIPQVMAIATLAACYNNQQVFMPAVKAIIYQYMEESSKTRQIISTRTQN
9SPARKS1ee4a0.0700.9771.113threading_9LGNVAGDSTDYRDYVLQCNAMEPILGLFNPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP-QEAIQAVIDVRIPKRLVELLSHTLVQTPALRAVGNIVTGNDLQTQVVINAG----VLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVADKTKKEACWAISNASSGGLQ
10PROSPECT21pw4A20.0970.8901.224threading_10TAK----------QIFMQYVLPNKLLWYIAIANVFVYLLR--------------YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIIGLHALELAPKKAAGTAAGFTGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVEQLLQELVP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.597 to 2onjA
SCOP code=c.37.1.12
TM-score=0.635 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.754 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.731 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.768 to 1uzrB
SCOP code=a.25.1.2