Template-based Modeling Results for YCCE_ECOLI


  Submitted Primary Sequence

>Length 418
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI
5533120000101110220022024213433210010021000001200230143234331200103202310241333330100021032332100100220010001002112001010223123211203000000000003203100200030013333120223202121012022301120020013201321202102031200000000000233212111422321320033003101230020002100120130022011031321231222211111011101220031013333000100200022332000012222210310220010001100010022020000100333123332031000021111000100110013014022330111021023224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI
1PROSPECT21f0ia0.0840.9401.331threading_1APGCWGDDKCADRVGTKRLLAKMTENIGNATRTVDISTFPNGAFQDAIVAGLKESAAKGNAAPHMNGIPSKYRDKL-----TAKLGKAAENITLNVAMTTSKTAFSWNILVVDGQSALTGGINSWKDDYLDTTHPVSALTGPAAGSAGRYLDTLWTWTCKNKSNIASVWFAASGNAGCMPT-------------MHKDTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDGLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPANRGYSQ----IKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNGKWADGHPYAQHHPSWLQIVESPEAAKQLDA---KLLDPQWKYSQETAT
2HHPRED-l3pfy_A0.1910.2631.088threading_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPATVE--QQEHWFEKALRDKKGFIIKQ-KEDGACLFRAVADQVYGDQ-------D-HEVVRKHC---------DYL-KN-----AD----YFS-------------NYV-------------------------------------------GNHI-----E--A--------YN--RPVEVYQYSTEPQNEDEPIRVSY--HRNIHYNSVVNP--------------------------
3HHPRED-g3by4_A0.2010.3561.153threading_3-------------------------------------------------------------------------------------------------------------------------------------------------------------------RVLKSTEM----------SIGGS----------GENVLSVHPVLDDNSCLFHAIAYGIF--------KQDSV------------------------RDLREMVSKEVLNN----P-------------VKFNDAILDK-----------P---N----------KDYAQWILKMESEIGIISDAL------AVAIYVVDIDAVKFNEDKFDNYILILFNGIHYDSTMNEDVLTAALQLASNLKQTGSF-------
4PROSPECT22bw3A0.1150.9741.327threading_4SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSASGFIDIKFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEKDGDLWTDNYIKRNFTLHYHENNELRDLILTDRGANVVKSLANNIRINSFEETPELNPILACIVKYFKKANLQHRLRSSLKSECPTRWNSTYTLRSILDNWESVIQILAGETQRIVHINKSIIQTVNILDGFERIFKECSSPSLCFVVPSILKVKPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINRSSFNELSATQLNQDISTTSFFFPQLTQNNSREPPVCPSDEFE------FYRKEIVILSEDFKVEWWNLNSKKY-----PKLSKLALSLGQQTVDSLLSFYKNFCK
5PROSPECT21jdha0.0930.9311.272threading_5AVVNLIRLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVTLHNLSHHREGLLAIFKSGGIPLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAIT-------------TDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKRVLKVLSVCSS---NKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDIMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLQGAIAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLELAQDKEAAEAIEAEGA-------------TAPLTELLHSRNEGVATYAAAVLFRMS
6PROSPECT21ejlI0.1080.8421.260threading_6GTVNVKGINSNNLESQLQATQAARKLLSREK-------QPPIDNIIRLIPKFVSFLGKTDCSPIQFESASEQTKAVVDGGAIPAFISLLASPHAHI----------------------------------------SEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLANKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKSNITAGRQDQIQQVVNHGLVPFLVG-------------------VLSKADFKTQKEAAWAITNYTSGEQIVYLVHCGIIPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEENESVYKASLNLIEKYFS
7PROSPECT21w36D0.0980.9001.257threading_7VAGDEHPAVTLAAALLSHDAGNWEECLLASQAVSPMILCGDRLYLNRMWCNERTVAEVNHAIEVDEALLAQTLDKLDEINWQKVAAAVALTRRISVISGGPGTAALIQMADGERCRIRLAAPTG----------------KAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLHAGNPLHLDVLVVLPMMSRLIDALPDHAVEAGAVLGDICAYA----------NAGFTAERARQLSRLTGT-------HVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQS------GEDYIAMLEEALAGYGRYLDLLQAIQAFNEYQLLCALREGPFGRLPEHETTWAMTVHKRLSLYADERILSAAIATRTERRSG---LAALFSS
8MUSTER2vsfA0.1280.8970.544threading_8SERKLKVLYLVRNSQEEQVIKELRSLSSTMKIRAIPMQGRVNMCILYRMVDDLHEINAES-LAKFCNMKKREVMA--NEAACPYFNFKIRSTKRFLFDEL-----PTAE-----EFYDY---GE------RNNVCPYESMKAALPDADVAEKFLSHWGVSRNQIVI-PDIGSIGSFR-----ISVESLNRADREAQAYGDPELIHVSDLIEMIRSALQSMVSERCG---GDVRIRFQEFMEYMRIMNK-RSEREIRSLLNYLYLFGEYVE-------NEKEKVGK-VPFSYCSSVASRIIAFSDEEKYAAILSP---EDGGYMQAACLDPSGILEVLKESKTIHFDFYSDITFPPENRYIAYYDGVSSKDEKELDMATVIKVKKNTIVYFPYSLMDRVENRDQKELYSMLKKFRRDGT
9SPARKS1a4ya0.1480.9350.552threading_9-SLDIQSLDIQCEELSDARWAELLPLLQQCQ--VVRLDDCGLARCKDISSALRVNPALAEL-NLRSNELGDVGVHCVLQGTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLS-----DNLLGD------AGLQLLCEGLLDPQCRLEKLQLEYCSLSAAASVLAKPDFKELTSNNDINGVRVLCQGLKEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPRLRTLWAKGCGDLCRVLRSLKELSL-AGNELGDEGATLLEPGCQLESLWVKSCFTAACCS-HFSSVLAQNRFLELQISNNEDAGVRELCQGLRVLCSSLAATLLANHSLRELDLSNNCLGDAESVRQPQLVLYDI----YWSEEMEDRLQAL--EKDKPSLRVIS----
10PROSPECT21xm9A0.0860.8611.256threading_10GLTAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGIAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEILLWNLSSTDELKEELIADALPVLAD-----------RVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYS--------------------GLIDSLMAYVQNCVAA-------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQ----------NLTASKGLMSSGMSQLIGLKEKGLPQIARL----------LQSGNSDVVRSGASLLSNMSPLLHRVMGNQVFPEVTRLLTSHTGNTSNSERNLMASQPQLAKQYFSSSMLNNIINLASPKAAEAARLLLSDVL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.555 to 1q32B
SCOP code=d.136.1.3
TM-score=0.339 to 1tffA
SCOP code=d.3.1.11
TM-score=0.366 to 1tffA
SCOP code=d.3.1.11
TM-score=0.529 to 2bw3A
SCOP code=a.270.1.1
TM-score=0.631 to 1wa5B
SCOP code=a.118.1.1