Template-based Modeling Results for YCEI_ECOLI

Submitted Primary Sequence

>Length 191
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEECEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCCCCCCCCCEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
42301100000000000000012212012412100000201100002020102211010111343322120001010000213223103203223002023122010101102332320202010102211120202020113131222121000202020203103031211301220102010201237
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
1	MUSTER	1y0gA	1.000	0.885	3.881	threading_1	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
2	SPARKS	1y0ga	1.000	0.885	5.822	threading_2	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
3	PROSPECT2	1y0gA	1.000	0.885	3.592	threading_3	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
4	PPA-I	1y0gA	1.000	0.885	5.419	threading_4	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
5	HHPRED-l	1y0g_A	1.000	0.880	6.893	threading_5	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQ-
6	HHPRED-g	1y0g_A	1.000	0.885	5.992	threading_6	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
7	SP3	1y0ga	1.000	0.885	5.631	threading_7	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
8	SAM-T99	1y0gA	1.000	0.885	6.669	threading_8	----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
9	MUSTER	3hpeA	0.348	0.843	3.358	threading_9	----------------------KPYTID--KANSSVWFEVKHFKFNETRGVFDSFDGKIDADPNTKALNVFEGKIDIKSINTRNKKRDDHLKTAEFFDVVKYPKGSFKMTKYED----GKIHGDLTLHGVTKPVVLEAKIQAPLQNPMNKEFMVLQAEGKINRKDFGIGKTFAVVGDEVKIELKLEAYA--
10	SPARKS	3hpea	0.354	0.843	5.507	threading_10	----------------------KPYTIDK--ANSSVWFEVKHFKFNETRGVFDSFDGKIDADPNTKALNVFEGKIDIKSINTRNKKRDDHLKTAEFFDVVKYPKGSFKMTKYE----DGKIHGDLTLHGVTKPVVLEAKIQAPLQNPMNKEFMVLQAEGKINRKDFGIGKTFSVVGDEVKIELKLEAYA--

Predicted Tertiary Structure


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TM-score=0.941 to 1y0gA TM-score=0.998 to native SCOP code=b.61.6.1	TM-score=0.941 to 1y0gA TM-score=0.998 to native SCOP code=b.61.6.1	TM-score=0.941 to 1y0gA TM-score=0.998 to native SCOP code=b.61.6.1	TM-score=0.941 to 1y0gA TM-score=0.998 to native SCOP code=b.61.6.1	TM-score=0.941 to 1y0gA TM-score=0.998 to native SCOP code=b.61.6.1

Experimental Structure

Download 1y0gA

SCOP code=b.61.6.1