Template-based Modeling Results for YCGB_ECOLI


  Submitted Primary Sequence

>Length 510
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMGNL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMGNL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMGNL
553233233322201411311131022002101300431502113110100102100100110000010100100110111120142123100010001222000000231220000000000010000003200002111212000100100130022013310131022001001001310123132234222322323232333112210221122133433332223233223221210010022102202201220020012001111122102011200000000000010122230123000100310110001122212121100010000000100230032123113221232212311200220032021220012001230032030000112344220100011223103301320021031221200000111324232100010002232112400220020003002120001112342212011202343348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMGNL
1PROSPECT21w36B10.0900.8921.593threading_1MSDVAETLDPLRLPLQGERLTFTIAALYLRLLLGLGGSAAFPRPLTLLVVTFTEAATAEL-----------RGRIRSNIHELRIACLRETT-------------------DNPLYERLL------------------EEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQAREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRDDMLSRLDSALRSESGEVLAAAIRTRFQQYRIFRRIWHHQPADIFTYMKARSEVHAHYTLD------TNWRSAPGM-VNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGGDYQSTMAQVCAAQIRDQRGEALLMNGDDARPVISVLVRSRQEAAQVRDALTLRDRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRAERLAEDLRLLYVALTRSVWHCSLGLCDDDIAWQTAQTGDNQV
2PPA-I2bw3A0.0720.8731.051threading_2-------SHQSRELKTVS---ADCKKEAIEKCAQWVVRDCRPFSAVSSGFIDIKFFIKVKAEYGEHVNVEKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGERSTAENIYKKLKAIFSQFRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELNPILACKNIVKYFKKANLQHRLRSSCPTRWNSTYTLRSILDNWESVIQILSEAGETQRIVHINKSIIQTVNILDGFERIFKELQTCSSPSLC----FVVPSILKVKEICSPDVGDVADI--AKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPA-----LHQQEKVA----QIKEFCLSKEDLELINRSSFNELSATQLNQDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKR----------NRIGLLFLNSFYKNFCK------------------------------
3HHPRED-l3iuk_A0.1470.6671.038threading_3FATTLGLPGHETEYQ---DYSPAGAAAHAEATRLALELAGLEPS-DDVDAVTLDA-RERLGLELEIHQSGWDAASPA-QDIRAIFD--L---PTDTVAANEGYIASLRAADRKVAAARQIRIV-IEQGAFLRDELLPVAPEKDA---VGRERYSLASRSFTYAWGVQELERLISEQEKVAGQIKPGSNNDQIKGTDAL---KAW-QELSDRAVSELADVHFDIPDV-KEDDPGWWPAGTTWS-ETTTVFHVPG-HHLQVATLNNWRRNVC------WVSGHGEGWALYAEQL-L-ELGKLGTWTPEKGFDFLKANLDILGWP-------GQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGLDVLRRAL-------------L------------------------------------------------------------------------------------------------------------------------
4SP32v1xa0.1440.8711.060threading_4--------------SSPAAWNKEWSGKVKDILQNV---FKLEKFPLQLETINVTAGKEVF--LVMPTGG-----GK-----SLCYQLALCSDGFTLVI-C-PLIS-LMEDQLMVLKQLISATMLNASSSKEHVKWVHAEMVNKNSLIEKIAKSKMFMSRLEKAYEARRFTRIVDEVHCCSQWGHDF--RPKALGILKRNHVLTDAQKILCIEKCFTFTA---SFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGII--------YCFSQKDSEQVTVGIAGAYH----------ANLETTVHRKWSANEIQVVV---ATVAFGMGIDPHSMSKSMENYYQESYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNRVLMAQHFDEVW-ACNKMCDNCCKDSA----FERKNITEYCRDLIKILKQAEELNEKLTPLKLIDS-WMGKGAAKLRVAGVAPTLPREDLEKIIAHFLIQ-QY-LKEDYSFTAYATISYLKIGPKANLL
5PROSPECT21gw5b0.0820.8881.567threading_5SKYFTTNKKGEAELNNEKK---EKRKEAVKKVIAAMTVGK-----------DVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQP-------DMAIMAVNSFVKDCEDPNPLIRALAVRTMGCITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLNAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFI-----------LDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLP---KDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVKEYATEVDVDFVRKAVRAIGRIKVEQSAERCVSTDIFRKYP-----NKYESIIATLCENLDSLDEPDARAAMIWIVEYAERIDNAD----------ELLESFLEGFHDESTQVQLTLLTAIVKLFLKK-------PSETQELVQQHKPPNAFV
6HHPRED-l3o0y_A0.1340.7041.037threading_6SATLSQKIGISSDME---FYSPENEKQLRAELLSISNTIGIKLD-DITTKNNQQVMAGLTGEPNFNIGYIDWINGPLIDIQTADAAQNWLKVTLQGATSGHPFVNVFREQVIAKVSQVVYPAYQ-SVEKASE-QLLSEARSEGWAQPKGSVYYQDAIKQLIHQIGLDEVARISGVMNEILLAQGKGLNEPLYEDSIALLSDINGYITEVTAKMAPVFRTTPSYQVEVKSPVEVQYSANPKF-GLKTLTYHNPG-HHWQIALNPFLRRIA-------PYNAYTEGWALYSEQVAY-ELHD-KRWTREQAISYMSEQTGTMAWP-------GQALGYKLGMLKILSLREQAKAGDKFDLAEFHDVVGAVPMAVLSRNVNH-----WLDN--------K------------------------------------------------------------------------------------------------------------------
7PROSPECT21qsaa0.0780.9351.527threading_7---------------DSLDEQRSRYAQIKQAWDDVVEQMMLKDYPLYPYLQPAVTVTNFVRANP-----TLPPARTLQSRFVNELARREDWRGLLAFSPEKPYYYAKWNTGQSEEAWQGAKELWLNACDKLFSVWRASGKQDPLAYLERIRLATGLVTVLAGQMPADYQTIAIISLANNPNTVLTFARTTGATDFTRQMAAVAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLAKDEWRYWQADLLLEHQLMQQRGFYPMVAAQRIGEE---YELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARNLVKSKSKTEQAQLARYAFNNQWWDLSVQAT--IAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPK--------VKSPVGASTVKMFSIPGYSSPGQLLDPLQYVYQQFGNNRIFLGNSAGRIDAVAYFMGDKPTLM
8PROSPECT21jdha0.0940.8591.521threading_8AVVNLIRAIPEKLLNDEDQ---VVVNKAAVMVHQLS-----KKEASRHAIMRSPQMVSAIVRTMQNTNDVEHNLSHHREGLLAIFKSGGIPALVKMLGSPVDTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL----------SVCSSNKPAIVEQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGL----PVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI-PRLVQLLVRAHQDTQFMEEIVEGCTGALHILAR-------------------DVHNRIVIRGLFVQLLYSPI------------------------------ENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEG
9PROSPECT21w63A0.0920.9411.457threading_9MPAPIRLRELIRTIRTARTQAEER-EMIQKECAAIRSSFREEDNTYRCRNV---AKLLYMHMLGYPAASQKFTDKRIGYLGAMLLLDERQDVHLLMTNHSTQFVKLLKTSNSYLRKKLCAVHVIRKVPELMEMPATKNLLNEKNHGVLHTSVVLLTESPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAM--NDILAQVATNTETSKNVGNAILYLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVN----GNNIRGMMKELCEPEFKADCASGIFLAAEKYAPSKRTTAGSYVRDDAVPNLIQLITNSVEAYTVQRLY--KAILGDY------------------SQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRKKYDHMRSALLERMPVMEK
10MUSTER2ooeA0.1060.8900.759threading_10MA--------EKKLEENPYWSIREAQN-IDKARKTYERL-VAQFPS-----SGRFWKLYIEA--------EIKAK-NYDKVEKLFQRCLMKVLHIDLWKC---LSYVRETKGKMAQAYDFALDKIGSYQIWVDYINFVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIE-DRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQPQEAQQVDM----WKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDI---WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYISTLLKKNMLLYFA-YADYEESRMKYEKVHS---YNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFRHHVYVTAALMEYYCSKDIPEYVLAYISHLNEDNNTRVLFERVLTSGSLPP---------EKSGEIWARLAFESNIGDLASILKVEKRRFTAFR-----EEYEGKETALLVDR---KFMDL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.558 to 1uaaA
SCOP code=c.37.1.19
TM-score=0.655 to 2bw3A
SCOP code=a.270.1.1
TM-score=0.418 to 1ka4A
SCOP code=d.92.1.5
TM-score=0.576 to 1oyyA
SCOP code=a.4.5.43
TM-score=0.637 to 2vglB
SCOP code=i.23.1.1