Template-based Modeling Results for YCHE_ECOLI


  Submitted Primary Sequence

>Length 215
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
54220100110010000000000000000000000232222111200110000000000000000100021010213002000000000000010113213333343332322233210000000210001000000000023132111000000000000000000020021003104310020012000000000001000100220022115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
1PROSPECT21pw4A20.0850.9301.170threading_1VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK----SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN-----------PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMKRRHEQLLQELVP
2PPA-I1pw4A20.0900.9261.036threading_2LPNKLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR----GNRGATGVFFMTLVTIATIVYWMNPA-----------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
3PROSPECT21xm9A0.1211.0001.161threading_3GICKLVDLQAAAGALRNLVETRRQNGIREAVSLLRRTGNAEIQKQLTGKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLNCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLGASLLSNMSRHPLLHRVMGNQVFPEVTREDILSSACYTVRNLMASQPQLAKQYFS
4PROSPECT21oyzA0.0840.9951.153threading_4NDDELFRLSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRR-DIGAFILGQIKICKKCEDNVFNILNNALNDKSACVRATAIESTAQRCVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELIEAAGELGDKTLLPVLTSAIDKLKS
5PROSPECT22of3A0.0841.0001.142threading_5AELLLSDNEDKKQRHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLARSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVDVNVRNAAINVLVACFKFEGDQMDKSLVEERIKRTGV
6PROSPECT21wa5C10.1140.8981.137threading_6MSDLETVAKFLAESERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKNVELIKKEIVPLMISLPNNLQVQIGEAISSIALSDLASRLSNDDMVT--------------------NKGVLTVAHSIFKRWRPLFRSDELFLEIKLVL--DVFTAPFLNLLKTVDEQITANEKASLNILFDVLLVLIKLYYDFQVGMGIFHKYLS
7MUSTER1b3uA0.1120.9950.817threading_7NQHVKSALASVIMGLSPILKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNLKKLVGKATIIPKVLAMSGDPNYLHRMTTLFCINVLSEQDITTKHMLPTVLRMA-ANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ
8SPARKS3e7qa0.1190.8600.943threading_8----------------------NQEVRFS-------RLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLFFEASFSAELLDPQLLDAWLAFWGAVGS-IEAIGRVHDHSYGEYRALLVGVLRQLAEEGAELAAISLSALLDGLWLESGTPRQGVQICEAWVDGLEA
9PROSPECT21ejlI0.1581.0001.120threading_9LIPKFVSFPIQFESAWALTNIASGTGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPTDGPNERIEMVVKKGVVPQLVKLLGATELALAVFPSLLTNPKTNIQKEATWTMSNIQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSIQVILDAISNIFQAYFS
10PPA-I4a2nB0.1120.8330.926threading_10MNENLWKICFIVMFIIWVFVRK-VYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFSS--YLDSFNINLPDSIRLFALIVTFLNIGLFTGNNWSAILEIKDGHKLVKEGIYKN--IRHPMYA--HLWLWVITQGIILSN--WVVLIFGIVAWAILYFIRVPKEEELLIEEFGDEYIEYMGK---------------------------

  Predicted Tertiary Structure

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TM-score=0.927 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.895 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.913 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.510 to 1xm9A
SCOP code=a.118.1.24
TM-score=0.837 to 1oyzA
SCOP code=a.118.1.16