Template-based Modeling Results for YCIC_ECOLI


  Submitted Primary Sequence

>Length 247
MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ
5512031002100100120000000000000000000010111231101102201311220001100220123112100100001000000010000000000021012223120020000002101300110110000121022321120011111211121112243210010010001000100210010000110010001000100100132001000100000000000000010011135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ
1PROSPECT22bkuB20.1070.9881.441threading_1-TDTVAETSASISTFVMDKLGQTMLQSNILTVLAAVIRKSVEPVADMLRLLEKKDSAFIEDDVFYAISALAASLGKGFEKY--LETFSPYLLKALVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFWVIDYIKQKRQLSL
2PPA-I3klyC0.1300.9681.178threading_2--TGEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLG---GLAFSLGLILVVITVAKASGKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLFLQAFALGLMCNILVCLAVWMTSARSLTDKVMVLILPVAMFV-SSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYA-DLNFVNFIVNNLIPVTLGNIVGGGVFVGMWYWLIYLK-
3PROSPECT23ibvA10.0780.9351.298threading_3MPSVGPIIKQQATDFIGKICHEITRLICLQTLSEKVREWNNESNLLELQMIRDS--------VWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSDFFASLQGVIAASSQSEFSNFYLKVLLSIGDEIADVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVSWIN------INLIVNEPCMNLLYSFLQ--IEELRCAACETMTEIVNKLNLLNILNLNLFFSK
4PPA-I3zuxA0.0960.9271.121threading_4LKPSDDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLN---LPAEIAVGVILVRGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGGS---KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYL-----LGFFAAKWTGLPYDAQKALTIEVGNSGLAAALAAAHFAAAPVVA--VPGALFSVWHNISGSLLATYWAAKA-----
5PROSPECT21ee4a0.0931.0001.265threading_5QELPQMQEQLSATVKFRQILDVVIQAGVVPRLVEWALTNIASGTSAQTKVVVDADYVLQCNAMEPILGLFNSNKPSLIRTADACWAISYLAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIDLQTQVVINAGVLPALRLLLSSPKENIKKEACWNTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLIKPLCDLLEIADNRIIEVTLDALENILKMGEADKMEKIFNCQQN
6PPA-I3g61A10.1080.9761.121threading_6--VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIF---GDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRRQKFFHAIMIGWFDVGELNTRLTDDVSKINEGIGD-KIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIQLTLLLLAIVPIIAIAGVVEMKMLSGQALK
7PROSPECT23l6aA0.1060.9961.262threading_7HH-SKEELLKLTETVVTKHFLPEMLSKVIILISLLKQEGIATPLVKSYLAQFAARAIISELVSISELAQPLESGTHFPLFLLCLQQLAKLQDREWLTELFQQSMQKMLPEIDQNKDRMLEILEGKGLSFLFPLLKLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNAPSKEQLEQEKQLLLFKPVMQKFLHDHVDLQVSALYALQVHCYNMLLRFFVHFYAFLAA
8PPA-I3i9wA0.1370.9151.072threading_8-----------------PTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQ--LSQQIVAAADEIARLAQGQANNATTSAGATQAGIYLIEQDQRQAAESAL--DRLIDIDLEYVNQMNELRLSALRVQQMVMAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALYQQDSEISN
9PROSPECT21oyzA0.1150.9511.255threading_9KASKEYGLYNQCDDELFRSLKRISSARVLQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKVFNILNNALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLL------------KDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELNTVYDDIIEAAGELGDKTLLPVLDIITSAIDKLKRS
10PPA-I1b3uA30.1400.7211.059threading_10-------------------GIRQLSQSLLPAIVELAED---AKWRVRLAIIEYMPLLAGQLGLNSLCMAWDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTVDVKYFAQEALTVLLA-----------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.715 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.635 to 2abmA
SCOP code=f.19.1.1
TM-score=0.632 to 1wa5C
SCOP code=a.118.1.1
TM-score=0.446 to 1u6gC
SCOP code=a.118.1.2
TM-score=0.635 to 1wa5B
SCOP code=a.118.1.1