Template-based Modeling Results for YCJN_ECOLI


  Submitted Primary Sequence

>Length 430
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCHHHHHHHEEECCCEEEEEEEEEEEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
4310111000000000000104344432010100101133312200130022025313202010110323101210100042220010000012001001322013332112112311121013100320102222000000000100000000300240213203103100200230243232200000112311100100000001131200123120102122012002102200222111223122012002201000001000001001331333200000123433222111000000002424213001200200121310110022122110111220121121322310210020022012302313211221232022002100110011002201123220220032014302310443
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
1MUSTER3k01A0.1730.8882.581threading_1----------------------AMVELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDGTPALD--DGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTG-ATGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFGNLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK-AVERPWIAEGNAL-------------FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
2SPARKS3jzja0.1640.8814.474threading_2-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLD--GTPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKT-GATGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK---------AVERPWIAEGNAL-----FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
3PROSPECT23jzjA0.1640.8814.115threading_3-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYL--APLDGTPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDD----PYWFLPYLYGEGGDLVEKNKTVTVDDEAGVRAYRVIKDLVDSKADASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK---------AVERPWIAEGNALFEP-----IRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
4PPA-I3k01A0.1810.8883.267threading_4----------------------AMVELSGTVTFWDTSNEA-EKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDG--TPALDDGSDHLPQAAASTRYE--GKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDDP----YWFLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKADASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK-AVERPWIAEGNAL-------------FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
5HHPRED-l3uor_A0.1680.8742.445threading_5---------------------------KTTVRFWAMGK---EAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARKIVDPADYFPGVWDTNLVDG--TLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEFE----QQLSFALQQDDRLLDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKVTQSNVWYEFFNGYYAFYLSGPWNVREFKRQPEGNWGTAPLPGPNGL-GAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAI--IGDLPPRRSTWKLPSLANDALAHAFGDQL-------ERVKA-----TPKV--LEWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAK-
6HHPRED-g3uor_A0.1720.8772.040threading_6---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARKIVDPADYFPGVWDTNLVD--GTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEFE----QQLSFALQQDDRLLDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKETQSNVWYEFFNGYYAFYLSGPWNVREFKRQPEGNWGTAPLPGPNGL-GAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLER-VKATPKVL--------EWERI-----VQEMRLVTERVVRGGQSHDAAVQELDQRVDEILARW
7SP33jzja0.1720.8814.625threading_7-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDG--TPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAISDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDKAV-ERPWI--------AEGNAL-----FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
8SAM-T991eu8A0.2090.8913.514threading_8--------------------------EEGKIVFAVGG-APNEIEYWKGVIAEFEKKYPGVTVELKRQATEQRRLDLVNALRGKSSPDVFLMDVAWLGQFIAGWLEPLDDYVQKDNY-DLSVFFQSVINLADKQGGK-LYALPVYIDAGLLYYRKDLLEKYGYSPPETWQELVEMAQKIQETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLG-EDGKPTLNKPENVEALQFMVDLIKYKISPEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDVKGKVGVALPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKGFAMNL--GWNPGRVDVYDDPAVVSSPHLKELRAVFENAVPRPIV--------------PYYPQLSEIIQKYVNSALAGKISPQEALDKAQKEAEELVKQ-
9MUSTER3uorA0.1750.8792.503threading_9---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMPYVARSKIVDPADYFPGVWDTNLV--DGTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNE----FEQQLSFALQQDDRLLRDHNYGNFRGAGFRKALGFYDNMYQQGWAPETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLE-RVKATPKVL-------------EWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKR
10SPARKS3uora0.1750.8794.367threading_10---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMPYVARSKIVDPADYFPGVWDTNLV--DGTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEF----EQQLSFALQQDDRLLRDHDYGNFRGAGFRKALGFYDNMYQQGWAPKVSETNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLE-RVKATPKVLE-------------WERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.806 to 2nvuB
SCOP code=c.111.1.2
TM-score=0.813 to 2nvuB
SCOP code=c.111.1.2
TM-score=0.847 to 1eu8A
SCOP code=c.94.1.1
TM-score=0.848 to 1eu8A
SCOP code=c.94.1.1
TM-score=0.811 to 2nvuB
SCOP code=c.111.1.2