Template-based Modeling Results for YDCN_ECOLI


  Submitted Primary Sequence

>Length 178
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
4431132011002201443311022003113013000020234321110100120020030101100223322221012233220001000123342101000010222222322113331110000020101010322202022110010103110002011422010000011366
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
1MUSTER1y9qA0.4050.9724.029threading_1TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAY-PR-
2SPARKS1y9qa0.4100.9723.566threading_2TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEG-IKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
3PROSPECT21zz6A0.1530.9553.502threading_3--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMVYYVYNCLVRTKRAPSLVPLVVDVLTDN--PDDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----
4PPA-I1y9qA0.4100.9725.244threading_4TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
5HHPRED-l1y9q_A0.4210.9613.109threading_5-TDFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSRSFPDDLN-KIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQN-IVAYPR-
6HHPRED-g1y9q_A0.4150.9613.146threading_6-TDVKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSERSFPDDLN-KIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
7SP31zz6a0.1470.9553.265threading_7--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPNDLDDGVIIQMPDEYYVYNCLVRTKRAPSLVPLVVDVLTDNP--DDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----
8SAM-T991y9qA0.4070.9384.230threading_8TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFF-----NDPQLLSSERDLNKIHTLFPYAADTGLEIFEITLLDHH-QQSSPHALGVIEYIHVLEG-IKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAYP---
9MUSTER2bnnA0.1500.9723.204threading_9-KTASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGGLTLTQLGRIAHVLGTSIGALTPPAGNDLVIIQMPDERPYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNGHAGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAKGTGSAKLIAVNF----
10SPARKS1zz6a0.1530.9553.479threading_10--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPAGNDGVIIQMPDEVYYVYNCLVRTKRAPSLVPLVVDVLTDN--PDDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.981 to 1y9qA
SCOP code=a.35.1.8
TM-score=0.980 to 1y9qA
SCOP code=a.35.1.8
TM-score=0.981 to 1y9qA
SCOP code=a.35.1.8
TM-score=0.643 to 2bnnA
SCOP code=a.35.1.3
TM-score=0.981 to 1y9qA
SCOP code=a.35.1.8