Template-based Modeling Results for YDDH_ECOLI


  Submitted Primary Sequence

>Length 189
MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG
CCCCCCCCHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHCCCEEEECCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEECHHHCCCCCCCCCHHHCCEEEECCCCEEEEECCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG
554222132310120012000000001144332200000000000112101000001322201310230120000000220020021002211333211221202002032120000232010101010020112432000000100000013300132323013320100000120100111220235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG
1MUSTER1ejeA0.2450.9743.319threading_1MMSMDFFPVESAHRILTPRPTVMVTTVDEEG-NINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRIVEAP-GHLECELLRMFEVGD-HNLITGSVVSASVRSGAVKEGL--LDVESVKPVLHVGGNKFVVGDHVRHVE
2SPARKS1ejea0.2570.9684.508threading_2SMDFEDFPVESAHRILTPRPTVMVTTVDEEG-NINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRIVEAP-GHLECELLRMFEVG-DHNLITGSVVSASVRSGAVKEGL--LDVESVKPVLHVGGNKFVV-GDHVRHV
3PROSPECT21ejea0.2450.9742.937threading_3GSDFEDFPVESAHRILTPRPTVMVTTVDEEGN-INAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRI-VEAPGHLECELLRMFEVGD-HNLITGSVVSASVRSGAVKEG--LLDVESVKPVLHVGGNKFVVGDHVRHVE
4PPA-I1ejeA0.2450.9744.467threading_4SMDFEDFPVESAHRILTPRPTVMVTTVDEEG-NINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRIVE-APGHLECELLRMFEVG-DHNLITGSVVSASVRSGAVKEGL--LDVESVKPVLHVGGNKFVVGDHVRHVE
5HHPRED-l1eje_A0.2470.9633.821threading_5SMDFEDFPVESAHRILTPRPTVMVTTVDEE-GNINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPR-IVEAPGHLECELLRMFEV-GDHNLITGSVVSASVRSGAVKEG--LLDVESVKPVLHVG-GNKFVVGDHVRH-
6HHPRED-g3bpk_A0.1910.9423.665threading_6-LSINPNEEKDNYKLLIPRPVAFVTSVTKEG-VLNGAPYSYFNIVAANPPLISVSVGERKDTSRNAIEKGEFVVHISDESYVAAINETAAN----ESEIELAKLTPIESEVISVPGVKEANI-R-ECVLERAIPLGGTCDLLIGRVVRFHVAEHLYEKG--RIHAEGLKPISRLAGHNYAKLGEQFEL-
7SP32d5ma0.2820.9374.381threading_7MKKSL-----GARTLAYPTPLFLVGTYDRDS-RPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRAYVRHADYAGIYSGENEDKFASLGLTPVPGEHVDAPYVGEFP-MAIELKLIHQI----EHTQFIGEIMDVKVDESCLRDD-GLPDINKVDPVIFAPVSEYYAVGEFLAKA
8SAM-T992d5mA0.2670.9313.790threading_8------KKSLGARTLAYPTPLFLVGTYDR-DSRPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRAYVRHADYAGIYSGENEDKFASLGLTPVPGEHVDAPYVGE-FPMAIELKLIHQIE----HTQFIGEIMDVKVDESCL-RDDGLPDINKVDPVIFPVSREYYAVGEFLAKA
9MUSTER2d5mA0.2770.9373.288threading_9MKKSL-----GARTLAYPTPLFLVGTYDRDS-RPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRAYVRHADYAGIYSGENEDKFASLGLTPVPGEHVDAPYVGEFP-MAIELKLIHQIE----HTQFIGEIMDVKVDESCLRDD-GLPDINKVDPVIFAPVSEYYAVGEFLAKA
10SPARKS3fgea0.1750.9684.344threading_10FSHINALETRTRAHFSGFKSANLIGTQDRQG-NTNLSIVSSVIHLGANPPLGII--RPPRHTFEN-IQTGLYTINHVNQSIYEQAHQTSARYDKDESEFEATGLTPEYLSDFCAPFVKESR-LKYSVKLVEHQHLANGTEFVIGEIVDVYVDDNAVQTD-GFIDLQAIDTVAISGLDCYYTGDKLARLP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.919 to 1ejeA
SCOP code=b.45.1.2
TM-score=0.919 to 1ejeA
SCOP code=b.45.1.2
TM-score=0.909 to 1ejeA
SCOP code=b.45.1.2
TM-score=0.919 to 1ejeA
SCOP code=b.45.1.2
TM-score=0.919 to 1ejeA
SCOP code=b.45.1.2