Template-based Modeling Results for YDEU_ECOLI


  Submitted Primary Sequence

>Length 466
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
CCCCCCCCCCEEEEECCEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
5433224301000010111122010000000123323101000213241202010111222223223001001011312120011201010011001002142334310001122311222222222222222323122212220011000000001100220122112231122222322110000100112121322313120201110000000001122224321000000000102010222222232314220100000001112211420000000000000100011223223323120000002021102002112232222200010101000000222332343102021223110101000101010212233242220100010000121412002121210123124100101000102023200010100011134122102010001032
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW
1MUSTER3aehA0.1940.5861.633threading_1------------------------------------------------------------------------------------------------------------------------------------GTMARNDGQGKAAATFMHISYNNFITEVDNLNKRMGD------LRDINGEAGTWVRLLNGSGSADGG-----FTDHYTLLQMGADRKHE--LGSMDLFTGVMATYTDTDASADL------YSGKTKSWGGGFYASGLF----RSGAYFDVIAKYIHNENKYDLNFAGKQNFRSHSLYAGAEVGYRYHLT---------DTTFVEPQAELVWGRLQGQN------------SVNPLVGRTGVVSGKTFSGKD-------WSLTARAGLHYEFDLT----------DSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDDAINANIRYSF
2HHPRED-l3kvn_X0.1530.9234.920threading_2IAAASTSPQGIADG-NNWAVGGYRNTLLRSRDGGADPNALYYITGGGNGARYIVVWLLPDLGLTPATFG-----GPLQSGTFNALTAQLSQAGANVIPLKEGMANPASFGLANLIGTNTMYDPSKLLFN-DSVHPTIQRLIAPWETLLPEMAHGTLRAYQDELRSQWQADWE---NWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRID-----EAWRAGVAAGFYRQKLEAGAK----DSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDLKRKFAGGERSEKGDTNGHLWAFSARLGYDIAQQA-------DSPWHLSPFVSADYARVEVDGYSEKGALDYDDQKRSSKRLGAGLQGKY-A-------FGSDTQLFAEYAHEREYEDDTQDLTFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGED-DTQQSVSLALSLD-
3HHPRED-g3ml3_A0.3390.2474.026threading_3VILNNSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSSDKNAFI-QKGRIVAGSYDYRLKQGTALNTNKWYLTSQMD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4SPARKS3slja0.1760.6354.861threading_4-------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVANLNKRMGD------LRDINGEAGAWARIMSGTGSASG-----GFSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSAS------ADVFSGKTKSVGAGLYASAM----FDSGAYIDLIGKYVHHDNEYTATFAGLRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFSG-----KDWKVTARAGLGYQFDLLAVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
5PROSPECT23qq2A0.2240.5172.730threading_5------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAGGPWARTFSERQQISNA-----YDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYPGD-----GGGKVKGLHVGGYAAYVG----DGGYYLDTVLRLGRYDQQYNIAGTDGGRYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIA----LAGGNIVQPYARLGWTQEFK----------------SGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
6PPA-I3qq2A0.2280.5171.906threading_6------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAGGPWARTFSERQQISNA-----YDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYPG-----DGGGKVKGLHVGGYAAYV----GDGGYYLDTVLRLGRYDQQYNIAGTDGGDYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRR----IALAGGNIVQPYARLGWTQEFKS----------------GRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
7HHPRED-l3slt_A0.1760.6225.312threading_7---------------------------------------------------------------------------------------------------------------------------------------HANKEATRNAAALFSVDYKAFLNEVSNLNKRMGDLRDI------NGEAGAWARIMSGTGSAS-----GGFSDNYTHVQVGVDKKHEL--DGLDLFTGFTVTHTDSSASADV------FSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATGLGTRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSG-----K--DWKVTARAGLGYQFDANETVLDGKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYS-
8HHPRED-g3slt_A0.1710.6295.008threading_8-------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVSNLNKRMGDLRDI------NGEAGAWARIMSGTGSA-----SGGFSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSASAD------VFSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATFLGTRDYSTHSWYAGAEAGYRYHVTE---------DAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSG-------KDWKVTARAGLGYQFDANETVLRGKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
9SP33slja0.1620.6355.346threading_9----------------------------------------------------------------------------------------------------------------------------------------HHHANKEATRNAAALFSVDYKAFLNEVANLN---KRMGDLRDINGEAGAWARIMSGTGSASGG-----FSDNYTHVQVGVDKKHE--LDGLDLFTGFTVTHTDSSAS------ADVFSGKTKSVGAGLYASAMFD----SGAYIDLIGKYVHHDNEYTATFAGLRDYSTHSWYAGAEAGYRYHVT---------EDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFSG-----KDWKVTARAGLGYQFDLLAVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
10SAM-T993qq2A0.2300.5135.386threading_10-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGPWARTFSERQQIS-----NAYDQTVSGLEIGLDRGW--SASGGRWYAGGLLGYTYADRTYP-----GDGGGKVKGLHVGGYAAYVGDG----GYYLDTVLRLGRYDQQYNDGGRVTADYRTSGAAWSLEGGRRFELP---------NDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIAL----AGGNIVQPYARLGWTQEF-----------------SGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF

  Predicted Tertiary Structure

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TM-score=0.666 to 1uynX
SCOP code=f.4.5.1
TM-score=0.730 to 1uynX
SCOP code=f.4.5.1
TM-score=0.666 to 1uynX
SCOP code=f.4.5.1
TM-score=0.423 to 1dabA
SCOP code=b.80.1.7
TM-score=0.671 to 1uynX
SCOP code=f.4.5.1