Template-based Modeling Results for YDHX_ECOLI


  Submitted Primary Sequence

>Length 222
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHCCCEECCHHCCCCCCEEEECCHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
552212210200000000001122122324433211000000124021030002002522312231210000202234333412110012001103201003101120012144000100221020000001001130110232222122010002001432220100100133000004331220211133232220222221302001111332234444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
1MUSTER2vpzB0.3760.8384.036threading_1---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERDVLRPEQGTRPKLFYLNAPSLTRESEV
2SPARKS1kqfb0.2450.9555.413threading_2-AMETQDIIKR-------SATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRV-SVGQEPACVKTCPTGAIHFGTKKEELAEQRVAKLHAGVYNPEGVGGTHVMYVLH-HADQPELY
3PROSPECT22vpwB0.3710.8384.740threading_3MP---------------------------------RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCAH-RLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERDVLRPEQGTRPKLFYLNAPSKKGLTRH
4PPA-I2vpzB0.3660.8387.739threading_4---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAERVDLRPEQGTRPKLFYLNAPSKKGLTRE
5HHPRED-l1ti6_B0.2380.8335.134threading_5---------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEWPRWMNIERR-ERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAH-LLDDEKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVYYKNLYRFEKNYV-
6HHPRED-g2ivf_B0.2500.8474.879threading_6---------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHMRVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKRENGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCYP-RIEKGIANACNRQCPGRVRAFGYLDDTHVHKLVKKWKALPLHAEYGTGPNIYYVPPMGARGFGED
7SP32vpwb0.3710.8384.789threading_7---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAEVDVLRPEQGTRPKLFYLNAPSKTRESEV
8SAM-T992vpzB0.3940.7886.200threading_8---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCA-HRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAADVLRPEQGTRPKLFYL-----------
9MUSTER1ti4B10.2350.8243.611threading_9---------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRE-RGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLDDAPKMPRCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVYYKNLYRFEK----
10SPARKS2vpwb0.3710.8385.218threading_10---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV-GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPPVAKALKAAEVDVLRPEQGTRPKLFYLNAPSKKRESEV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.773 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.781 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.831 to 1kqgB
SCOP code=d.58.1.5
TM-score=0.772 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.770 to 1ti4B
SCOP code=b.3.5.1