Template-based Modeling Results for YDHY_ECOLI


  Submitted Primary Sequence

>Length 208
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHCCCCCCEECCCCCEEEECCCCHHHHHHCCCCCEEEECHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
5432322213211211200200010000000000001101133332322222223232000000123010031001001322312222211102102222123322222222211000002102203200003101020101224300000033301000000200112001023322200101100200210111002012232134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
1MUSTER2vpzB0.2980.6782.799threading_1-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV----------GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCPACVETCPTYCRTFGDLEDPES
2SPARKS1kqfb0.2130.8564.073threading_2------------------------------AMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCPACVKTCPTGAIHFGTKKEMLE
3PROSPECT22vpwB0.2980.6783.478threading_3M-------------------------------------------------------PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGEYPNL----------VVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCAHCVETCPTYCRTFGDLEDPES
4PPA-I2vpzB0.2980.6784.231threading_4-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV----------GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCPACVETCPTYCRTFGDLEDPES
5HHPRED-l1kqf_B0.2150.8513.874threading_5-----------AMETQDIIKRSA-------------------TNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSARFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCPACVKTCPTGAIHFGTKKEML-
6HHPRED-g2ivf_B0.2940.7364.560threading_6-------------------------------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHNNVTTYPGKGYPREDQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCNACNRQCPGRVRAFGYLDDTTS
7SP31h0hb0.2190.7263.588threading_7---------------------------------------------------------SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDATGCVLFTPKDLEDYESVISACPYDVPRKVAESNQMAKCDMCPACVTSCPTGAMNFGDLSEMEA
8SAM-T992vpzB0.2980.6785.353threading_8-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWI----------REREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCPACVETCPTYCRTFGDLEDPES
9MUSTER1ti4B10.1850.7262.681threading_9-------------------------------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEWPGYTASMQRGHRWMNIERRERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQR-EDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCPRCAHNCGSFVYEFLKTTPEAM
10SPARKS1h0hb0.2190.7264.009threading_10---------------------------------------------------------SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKLEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDATGCVLFTPKDLEDYESVISACPYDVPRKVAESNQMAKCDMCPACVTSCPTGAMNFGDLSEMEA

  Predicted Tertiary Structure

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TM-score=0.635 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.738 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.690 to 1kqgB
SCOP code=d.58.1.5
TM-score=0.617 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.635 to 1ti4B
SCOP code=b.3.5.1