Template-based Modeling Results for YEFI_ECOLI

Submitted Primary Sequence

>Length 372
MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH
542110000001022110010022002103433301000001224324332320200202323121012000100001200331201000001201031132220000010011132211330011000000210000001000330200000121013200420213320001020311332322322121332323100000011322220310010032034323120000010233210210023031231010002022310110031010000002121110000002211210000102102100222210000213113100300120232301320131012111220020012002201334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH
1	MUSTER	2jjmL	0.139	0.927	2.055	threading_1	--KLKIGITC---YPGGSGVVGTELGKQLAERG-HEIHFITSGL---PKVYPNIYFHEVTVNFQYP-PYDLALASKMAEVAQRENLDILHVHYAIPHAICRIKIVTTLHGTDITVLGSDPS--------------LNNLIRFGIEQSDVVTAVSHSLINETHELVK-PNKDIQTVYNFIDERVYFKRDMTQLKKYGISKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN--VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLDEELHRNMGERARESVYEQFSEKIVSQYETIYYDV
2	SPARKS	3c48a	0.100	0.970	4.481	threading_2	-SHMRVAMISMHTLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEVAENLRVINIAAGPYPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVWRIPLIHTAHTLAAVKNSYDT----------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGTERSRRELLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRPDRNLRVIICGGPSDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
3	PROSPECT2	3c48A	0.108	0.973	3.361	threading_3	SHMRVAMISMHTSLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVENLRVINIAAGPYPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVWRIPLIHTAHTLAAVKNSYDTPE----------SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGTERSRRELLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDDRNLRVIICGGPSDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLDDDETRIRMGEDAVEHARTFSWAQLSSLYNDAIANE
4	PPA-I	2iw1A	0.120	0.965	3.202	threading_4	---IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC---PKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLD-----VYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRN--DVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIEPFSQEQLNEVLRKALQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG
5	HHPRED-l	2r60_A	0.122	0.989	3.163	threading_5	--KHVAFLNPQGNFFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENIDYTNKVRIVRIPFGGDKLWPYLHEYVNKIINFYREEGPQVVTTHYGDGGLAGVL-LKNIKGLPFTFTGHSLGAQKMEKLDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHYRDDKFSVIPPGVNTRVFDGEAKITKYLEERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDNLVLTLRGNPELGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWAYQEKGKQYTWQETARGYLEVIQEIADR-
6	HHPRED-g	3c48_A	0.104	0.957	2.879	threading_6	-SHMRVAMHTSPLQ--GMNVYILSTATELAKQGIEVDIYTRATRGEIVRVAENLRVINIAAGPYEGLPTQLAAFGGMLSFREKVTYDLIHSHYWLSGQLWRIPLIHTAHTLAAVKNSY----DT------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG--SRRELGIPTKVVAFVGRLQPFKGPQVLIKAVAALFDRDDRNLRVIICGGPS-TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
7	SP3	3c48a	0.103	0.965	4.313	threading_7	M---RVAMMHTSPLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIAENLRVINIAAGPYELPTQLAAFTGGMLSFTRRVTYDLIHSHYWLSGQLWRIPLIHTAHTLAAVKNSYDT----------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGTERSRRELLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDDRNLRVIICGGPSDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA
8	SAM-T99	3c4qA	0.130	0.892	3.724	threading_8	-MRVAMISMHTSPDSGGMNVYILSTATELAK-QGIEVDIYTRSQGEIVRVAENLRVINIAAPYEGLSKEELPTQLAMLSFTRRETYDLIHSHYWLSRDLWRIPLIHTAHTLAAVDTPESEA--------------RRICEQQLVDNADVLAVNTQEEMQDLMHHYDPDRISVVSPGADVELYSPRATERSRRELGIHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDNLRVIICG-----GPTYRHMAEELKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDETRIRMGEDAIANE-------------------
9	MUSTER	2iw1A	0.120	0.960	2.049	threading_9	---IVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSWEG--DCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLD-----VYFAADVAEKVAQEKGFLYRLTSRYRHYAAFERATFEQ--GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRN--DVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIEPFSQEQLNEVLRKALQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG
10	SPARKS	3mboa	0.134	0.946	4.254	threading_10	M-KLKIGITCYP-SVGGSGVVGTELGKQLAERG-HEIHFITSGLPFVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHIGERIKIVTTLHGTDITVLGSDPS--------------LNNLIRFGIEQSDVVTAVSHSLINETHELVK-PNKDIQTVYNFIDERVYFKRDMTQLKKSESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQD--NVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLDEELHRNMGERARESVYEFRSEKIVSQYETIYYDV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.778 to 2iw1A SCOP code=c.87.1.8	TM-score=0.960 to 2iw1A SCOP code=c.87.1.8	TM-score=0.631 to 2iw1A SCOP code=c.87.1.8	TM-score=0.630 to 2bfwA SCOP code=c.87.1.8	TM-score=0.962 to 2iw1A SCOP code=c.87.1.8