Template-based Modeling Results for YEHD_ECOLI


  Submitted Primary Sequence

>Length 180
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
CHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECEEEEEECCCCEEEEECCCEEHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
423111000000000000000012232010102010020102022222211020120012102231332223322211101020202442210200011234112213211222200000001223111122212131322422422110101000031122313202020101020146
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
1MUSTER2jmrA0.1280.8281.790threading_1------------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVPFRILL------SPCGNAVSAVKVGFTGVADSHNANLLTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTTPGKPNTLNFYARLMATQ-VPVTAGHINATATFTLEYQ
2SPARKS3jwne0.1410.8283.988threading_2-------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVP----FRILLS-PCGNAVSAVKVGFTGVADSHNANLLTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
3PROSPECT22j2zB0.0920.7831.803threading_3----------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPE-------RKFSLRLRNCESDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGNI---ARAGKVMPAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
4PPA-I2j2zB0.0740.8223.274threading_4----------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSQGLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGNIARA---GKVMPAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
5HHPRED-l2uy6_B0.1250.8004.087threading_5----------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGV-SKPMDLDIELVNCDITAFK--KGTVKLAFTGPIVNGHDELDTNGGTGL-AIVV-QGAGK-NVVFDG-SEGDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTY-
6HHPRED-g2uy6_B0.1390.8004.091threading_6----------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGV-SKPMDLDIELNCDITAFK---KGTVKLAFTGPIVNGHSDELDNGGTGL-AIVV-QGAGKNVVFDG--SEGDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTYQ
7SP33jwne0.1340.8283.716threading_7-------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVP----FRILLS-PCGNAVSAVKVGFTGVADSHNANLLAVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTLTPGKPNTLNFYARLMATQV-PVTAGHINATATFTLEYQ
8SAM-T992jtyA0.2010.8284.030threading_8--------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGA------TSSAVGFNIQLDCDTNVASKAAVAFLGTAIHTNVLALQGSATNVGVQILDRTGALTLDGATFSSETT--LNNGTNTIPFQARYFATGA--ATPGAANADATFKVQY-
9MUSTER2j2zB0.0740.8221.739threading_9----------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSGNLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGNIARA---GKVMPAIPLTGNEEALDYTLRIVRN-GKKLEAGNYFAVLGFRVDYE
10SPARKS2jtya0.1760.8503.648threading_10--------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVG----FNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVAAGSATNVGVQILDRTGA-ALTLDGATFSSETTLNNGTNTIPFQARYFATG--AATPGAANADATFKVQYQ

  Predicted Tertiary Structure

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TM-score=0.668 to 1pdkB
SCOP code=b.2.3.2
TM-score=0.832 to 2j2zB
SCOP code=b.2.3.2
TM-score=0.667 to 1klfP
SCOP code=b.2.3.2
TM-score=0.779 to 2j2zB
SCOP code=b.2.3.2
TM-score=0.837 to 2j2zB
SCOP code=b.2.3.2