Template-based Modeling Results for YEJB_ECOLI

Submitted Primary Sequence

>Length 364
MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR
3011002001100000000000000002002101012000113213211221122322322323222132221113123202230022004311122000210020000002011020123212002102310121012011111121111111002211341230110000011001000000000000000001020200103011113122111122001000000000000000000000100011002203320010031220231000010002100000000000100010010110010001020001000100122111000000000000000010000000000013122334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR
1	PROSPECT2	1jdha	0.080	0.956	1.543	threading_1	MVSAIVRTMQNGLLAIFKSGGIPALVKMLGSPVDLQKMVALLNKTNVKFLAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEGMQALGLHDAATKQEGMEGLLGTLVQLLGSINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRH-----QEAEMAQNAVRLHYGLPVVVWPLIKATVGLIRNLALCPANHAPLREQGAIPRL-VQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRG----------LNTIPLFVQLLYSPIENIQRVAAGVLCELKEAAEAIEAPLTELLNEGVATYAS
2	PPA-I	3dhwA	0.173	0.538	1.092	threading_2	-----------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGKLYRTVSAIVNIFRSIPFIILLVWMIPFTRV---------IVGTSIG----------------LQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMG--GAVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGD---------------
3	PROSPECT2	1b3ua	0.115	1.000	1.543	threading_3	LIDELLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKHEHSPSDLEAVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSTLRQAAEDKSWRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCVKEFCENLSADCRENVIMSQILPCIKELVQHVKSALASVIMGLSPILKDNTIEHLECPEVRLNIISNLDCNEVIGIRQLSQSLLPAIVELALAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATTLFCINVLSEVCGQDITTKHMDVDVKLSLA
4	HHPRED-l	3tui_A	0.163	0.574	4.852	threading_4	------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSI-------------------------GLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAA-TITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-------
5	SP3	3puvg	0.146	0.772	1.519	threading_5	-------QKARLFITHLLLLLFIAAIMF-----PLLMVVAIS--------------------------------LRQGNFATGSLI--------PEQISWDHWKLALGFSVEQADGRITPPPFP----VLLWLWNSVKVAGISAIGIVALSTTCAYAFARMR-FPGKATLLKGMLIFQMFPAVLSLVALYALFDR---LGEYIPFIGL--------------NTHGGVIFAYLG----GIALHVWTIKGYFET-IDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAIPVASLLLVNSYTLA-VGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLA-QRW-LVNG-LTAGGV
6	HHPRED-g	3tui_A	0.182	0.574	4.621	threading_6	------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTR--V---IVGTS----IG-------------LQAAIVP---LTVGAAPFIARMVENALL-EIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITL-ITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-------
7	SP3	3tuia	0.187	0.574	1.544	threading_7	------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVRPGAKLYRTVSAIVNIFRSIP-FIILLVWMIPFTR------V-IVGTS------IGLQAA-----------IVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY-SAMGGAVGAG-GLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVT-R------
8	PROSPECT2	1ejlI	0.092	0.959	1.532	threading_8	SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFE-------SAWALTNIASGTSEQTKAVVDGGAIHAHISEQAVWALGNIAGDGSAFDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLPEVLADSCWAISYLTDGPNERIEM-------VVKKGVVPQLVKLLLPIVTPALRAIGNTDEQTQKVIDAGALAVFPKTNIQKEATWTMAGRQDQIQQVVNHGLVPFLVGVAAWAITNYTGTVEQIVYLVHCGII-EPLMNLLSAKDTKIIQVILDAISNIFQAAEKLSIMIEECGNESVYKAFS
9	HHPRED-l	3d31_C	0.142	0.640	3.713	threading_9	-------------------------------------------------------------------------------------------------PLTFVFLLVLNMIFQITEDFSGL-VKAANRSVISSIFLSLYAGFLATLLALLLGAPTGYILARF-DFPGKRLVESIIDVPVVVPHTVAGIALLTVFGS---RGLIGEPLE-SY-----------IQFRDALPGIVVAMLFVSMPYLANSAREG-FKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSV-MTWARAISEFGAVVILAYYPVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR---------------
10	PROSPECT2	3a6pA1	0.078	0.912	1.512	threading_10	QVNALCEQLVKAVTVMMICVPCGLRLAEKTQVAIVRHFGLQIL---------------------------EHVVKFRWNGMSRLEKVYLKNSVNILEEIKDALSRIVVEMIKREWPQHW---PDMLIELDTLSKQGETQTELVMFILLRLAEDVVIQQTLTQNRIFSFLLNTLQENVNKYQQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNELQLGAAECLLIAVVAMHYILSAAQCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAQFLRSSTQMTWGALFRHRASMTNLPSKTDSPSCEYSRFDFDSDEDFNAFFVMRLACRLDPKTSFQMAGEWLKYQL--STF

Predicted Tertiary Structure


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TM-score=0.779 to 1t5jA SCOP code=a.209.1.1	TM-score=0.654 to 1ialA SCOP code=a.118.1.1	TM-score=0.518 to 2q6hA SCOP code=f.54.1.1	TM-score=0.726 to 3dhwA SCOP code=f.58.1.1	TM-score=0.625 to 1b3uA SCOP code=a.118.1.2