Template-based Modeling Results for YFHH_ECOLI

Submitted Primary Sequence

>Length 282
MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV
CCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV
330122022214301311220020002103102301032004303112100010043030310210110002102222322222232314243213200220032102002201321133102200200320210000000000000210011013000100002001000100220233000000011122430020021025230200000112211012201000001132322321200000000000000000002221320131033022104412
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV
1	MUSTER	3fxaA	0.182	0.642	1.512	threading_1	------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNYTKEQFSVI-----------
2	SAM-T99	3iwfB	0.276	0.309	2.225	threading_2	PNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVNTS-QEIANQLETSSTSIIRLSKKVTPGGFNELKTRLSKFLPKEVTQYNVNKLHS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	3shoa	0.170	0.645	2.761	threading_3	---------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVIVV--GGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG
4	PROSPECT2	3shoA	0.165	0.645	2.193	threading_4	---------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVI--VVGGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPTA-LTDSSVSPPARIADHVLVAATRG----VGHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG
5	PPA-I	3fxaA	0.183	0.660	2.357	threading_5	------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNYTKEQFSVIHPGGA------
6	HHPRED-l	3sho_A	0.189	0.638	2.438	threading_6	---------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAI-RADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLEGGSTLTITLANLRPTDL-IGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ-
7	HHPRED-g	3etn_A	0.199	0.606	2.590	threading_7	--------------------------------------------------------------------------------------------------IESIQELLQKEAQAVLNIPVTDAYEKAVELIVEQGKLVTSG-GKAGQIA-NIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNPGLKFIVITGNPDSPLASESDVCLSTGHPACTLG-TPTTSTTV-TVIGDILVVQT-KRTEFTIEEYSKRL--------
8	SP3	3shoa	0.176	0.645	2.925	threading_8	--------------------------------------------------------------------------------------------D-RQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVIVV--GGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVP-TALTDSSVSPPARIADHVLVAATRG----VGHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG
9	SAM-T99	1vimA	0.199	0.642	2.766	threading_9	MSLLRFLEVV------------------------------------------------------------------------------------------------SEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGE-----TVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTEKDLEARH
10	MUSTER	3shoA	0.187	0.645	1.444	threading_10	--------------------------------------------------------------------------------------------DR-QQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIR-ADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVP-TALTDSSVSPPARIADHVLVAATRGVG----HSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG

Predicted Tertiary Structure


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TM-score=0.678 to 1vimA SCOP code=c.80.1.3	TM-score=0.485 to 2o3fA SCOP code=a.4.1.20	TM-score=0.689 to 1vimA SCOP code=c.80.1.3	TM-score=0.653 to 1vimA SCOP code=c.80.1.3	TM-score=0.655 to 1vimA SCOP code=c.80.1.3