Template-based Modeling Results for YGCE_ECOLI


  Submitted Primary Sequence

>Length 492
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
CCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCCCCEECHHEEECCCCHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCHHHHHCCCCEECCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCEEEEECHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
554200000011010000000124020001020222312112230021012100200020022003313033310100000122100000213211001000011120230023123310221111000002001301210011111000003212112110002203022310040221110002012200321312220100000002002000000123220100000000000004222333201000000022200010000110010010013100310021033331113202323010000002100000110122111111000000112020210010011000000220021004304220210001110030200000001004020210222101000000000000011310220032003121202123200320220030003101310230033012002210110221232255
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
1MUSTER2zf5O0.2200.9133.258threading_1M-EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQ-HYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKRGEVMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWD--DELLELFDIPESVLPEVRESSEVYGYTKKE-----LLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVYSDNLLTTIAWGLNGRYALEGSIFVT-GAAVQWLRDGIK--IIKHASETEELATKLESNEGVYFVPAFVGLGAPY------WDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEKL--VQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAEL-WKAERIFEPKKTRERLYKGWKEAVKRAMGWA-------------------KVVDS---A
2SPARKS3kzba0.1900.9006.380threading_2LA-FYIATFDIGTTEVKAALADRDGGLHFQRSIALET-YGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQ-NFLPLDQDHEPLHRAVLYSDKRPLKEAEEINARHVVLGAK-DYVVLRLTGRHATDRTNASTTGLYRPKDDAWH--VELLADYGFSLDL-PRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPDPVGTIFRLAGIIAGKTLQVAPVLNAG-NILQWALTLVGHRPCAEYFHAAAEVQGVTVPDGLLFVPYLHAERCP------VELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL----GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADRESNILHPQGRRRRKFERFKQCVETLGR------------------------------
3PROSPECT22itmA0.2110.8945.098threading_3M----YIGIDLGTSGVKVILLNEQGEVVAAQTEKL-TVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQ--DVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLERQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDV--MLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHFCHALPQRWHLMSVMLSAAS-CLDWAAKLTG-----------LSNVPALIAAAQQADESAEPV-----WFLPYLSPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVV-HACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDGPALGAARLAQIAANPEKSLIELLPQL-PLEQSHLPDAQRYAAYQPRRETF-RRLYQQLLPLM----------------------A
4PPA-I2zf5O0.2160.9134.975threading_4-MEKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQ-HYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKRGEVMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWD--DELLELFDIPESVLPEVRESSEVYGYTKKE-----LLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVYSDNLLTTIAWGLNGRYALEGSIFVT-GAAVQWLRDGIK--IIKHASETEELATKLESNEGVYFVPAFVGLGAPY------WDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEKL--VQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAEL-WKAERIFEPKKTRERLYKGWKEAVKRAMGWAKVVDSA----------------------
5HHPRED-l3ll3_A0.2070.9043.935threading_5-SLKYIIG-DVGTTATKGVLYDINGKAVASVSKGYP-LIQTKVGQAEEDPKLIFDAVQEIIFDLTQK--IDGK-IAAISWSSQ-HSLIGLGSDDELLTNSITWADNCAKSIVQDAKNQAQKWIGIKEYIIFRLTGKLVTDTT-AAGTGILNLKTLTWDQE--LLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPS-AS-YFCYPAKTHYLLGGPVNNGGIVFNWARQTLFDA--------DETPQDFLD-VAQTAPAGSRNLPYLGGERAPIWDANARGSFVGLTR-HQKPE-ARAVIEGIIFNLYDAASNLIK-NTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-KEQQSGTLAA-FLARQALGLNQDL-SEIGQFAQADKVYFPNPKEAATYQKLFP-LYCEIRNALAASYGKFS-------------------
6HHPRED-g2d4w_A0.2170.9193.248threading_6--ADYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQI-FPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQRETAVVWDKTGKPVYNAIVWQDTRTQKIVDELGPKIKWIGNTDTWVLWNMTGVHVTDVTNASRTMLMDLDTLSWRED--IAADMGIPLSMLPDIRSSSEVYGHGRPR-----GLVPGVPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKSKNGLLTTVCYKIPAVYALEGSIAV-TGSLVQWLRDNL--GMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPY------WRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVIDNW-AEDKRWSPSMESGER-ERLYRNWKKAVTKTMEWVDEDVE-------------------
7SP33kzba0.1900.8966.470threading_7LA-FYIATFDIGTTEVKAALADRDGGLHFQRSIALE-TYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQNFLP-LDQDHEPLHRAVLYSDKRPLKEAEEINLRHVVLGAK-DYVVLRLTGRHATDRTNASTTGLYRPKDDAWH--VELLADYGFSLDL-PRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPDPVGTIFRLAGIIAGKTLQVAPVLNAG-NILQWALTLVG--HRPGEDCAEYFHAGVTVPDGLLFVPYLHAERCPV------ELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL----GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADRESNILHPQGRRRRKFERFKQCVETLGR------------------------------
8SAM-T992zf5O0.2180.9044.003threading_8M-EKFVLSLDEGTTSARAIIFDRESNIHGIGQY-EFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEWLLDNVPGLRKFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDE--LLELFDIPESVLPEVRESSEVYGYTKKEL-----LGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRYALEGSIFVTGAAVQWLRDGIKIIK----------HASETEELATKLE-SNEGVYFVPAFGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEK--LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTRE-IAELWKAERIFEPKMDEKTR-ERLYKGWKE-AVKRAMGWAK----------------------
9MUSTER3h3nX0.2130.9173.214threading_9AEKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQ-YFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTGQPIANAIVWQSRQSSPIADQLKNGELLFGTIDSWLVWKLTDGHVTDYSNASRTMLYNIHKLEWD--QEILDLLNIPSSMLPEVKSNSEVYGHTRS----YRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPSDNDLLTTIGYGINGYYALEGSIFVA-GSAIQWLRDGLR--MIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPY------WDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSM-AEEGQMFTPEEERDNLYEGWKQAVAATQTFKFK---AK---------------------
10SPARKS3ll3a0.1770.9076.255threading_10--SLKYIIGDVGTTATKGVLYDINGKAVASVSKGYPL-IQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQH--SLIGGSDDELLTNSITWADNCAKSIVQDAKNRGFKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWD--QELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKPSASYFCYPAD--KTHYLLGGPVNNGG-IVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAP------IWDANARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTK-KPVAINATGGFLKSDFVRQLCANIFNVPIVTKE--QQSGTLAAFLARQALGLNQDLSEIGQ-FAQADKVYFPNPKEAATYQKLFPLYCEIRNAL-AASYGKFS-------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.634 to 1huxA
SCOP code=c.55.1.5
TM-score=0.635 to 1huxA
SCOP code=c.55.1.5
TM-score=0.556 to 2aa4A
SCOP code=c.55.1.10
TM-score=0.558 to 1huxA
SCOP code=c.55.1.5
TM-score=0.633 to 1huxA
SCOP code=c.55.1.5