Template-based Modeling Results for YGCF_ECOLI

Submitted Primary Sequence

>Length 223
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
4512011001012131222110000000100101011011221133243431212100110232332221213200100133222121000121110021012002102522010001010113241221010001130225211300120133122010001322213102200220223331000001123333002100200123311001000211324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
1	MUSTER	3c8fA	0.160	0.870	1.045	threading_1	VIGRIHSFES-VDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFM--------------NASGGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVTDLVMLDLKQMNDVSNHRTLEFAKYLAWIRYVVVPGDDDDSAHRLGEFTRDMGNEKIELLPYHEKKETMERVKGILEQYGHK-----VMF----
2	SPARKS	3c8fa	0.190	0.874	1.740	threading_2	VIIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNA--------------SGGGVTASGGELQAEFVRDWFRACKKEGIHTCLDTNGFVRRYLEVTDLVMLDLKQMNDEIHQNLHRTLEFAKWIRYVVVPGDDDDSAHRLGEFTRDMGNEKIELLPYHEKKETMERVKGILEQYGHKVMF---------
3	PROSPECT2	3c8fA	0.154	0.874	1.753	threading_3	VIGRIHESCGTVDGPGI-----RFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLM--------------KEVVTYRHFMNASGGGVTASGGEAILQAVRDWFRACKKEGIHTCLDTNGFVRRYDEVTDLVMLDLKQMNDEILEFAKYLANKNVKVWIRYGWSDDDDSAHRLGEFTRDMGNVEKIEGVKPPKKETMERVKGILEQYGHKV---------MF
4	PPA-I	3c8fA1	0.213	0.547	0.918	threading_4	GRIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNAS--------------GGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYD------------------PVIDELLEVTDLVM----------------------------------------------------------------
5	HHPRED-l	3c8f_A	0.194	0.807	4.710	threading_5	GRIHSFESCGTVDGPGIR---FITF--FQGCLMRCLYCHNRDTWDTHGGK------------------EVTVEDLMKEVVTMNASGGGVTASGGEAILQAERDWFRACKKEGIHTCLDTNGFVRRYLEVTDLVMLDLKQMNDEIHQNLVG-----------VSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTEQYGHKVMF---------
6	HHPRED-g	3c8f_A	0.178	0.857	2.821	threading_6	IGIHSFESCGTVDGPGI---RFITF--FQGCLMRCLYCHNRDTWDTHGG------------------KEVTVEDLMKEVVTMNASGGGVTASGGEAILQEVRDWFRACKKEGIHTCLDTNGFVRRLLEVTDLVMLDLKQMNDENHRTLEFLANKNVKIRYVVVPSDDDDSAHRLGEFTRDMNVEKIELLPYHELGKTMERVKGILEQYGHKVMF---------
7	SP3	3c8fa	0.192	0.910	1.852	threading_7	VIIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV--------------VTYRHFMNASGGGVTASGGEAILQ-AEFVRDWFRACGIHTCLDTNGFVRRYLEVTDLVMLDLKQMGVSNHRTLEFAKYLANWIRYVVGWSDDDDSAHRLGEFTRDMGNEKIELLPYHGKHKWVAMGEEYKLDGVKPPKKTMERVKGIL
8	SAM-T99	3c8fA	0.180	0.821	1.808	threading_8	-RIHSFESCGTVDGPGIRF--------FQGCLMRCLYCHNRDTWDTHG--------------------EVTVEDLMKEVVTYRHFGGGVTASGGEAILQFVRDWFRACKKEGIHTCLDTNGFVRRLLEVTDLVMLDLKQMNDEIYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEKKETMERVKGILEQYGHKV-----------
9	MUSTER	3c8fA1	0.205	0.547	0.855	threading_9	VIIHSFESCGTVDGPGI---RFITFFQ--GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNA--------------SGGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYD------------------PVIDELLEVTD---LVM-------------------------------------------------------------
10	SPARKS	2yx0a	0.166	0.946	1.268	threading_10	GRFCYKQKFYGIHSHRCLQMTPV----LAWCTHNCIFCMENFLGTELPQPWDDPAFIVEESIKAQKLLIGYKPKVDKKKFEEAWNPTHAAISLGEPMLYPMGDLVEEFHKRGFTTFIVTNGTIPKEDKLPTQLYVSIIPMIPDGWERILRFLELMRVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMNRINNHQDIREFAEA--------LVKHLPIE

Predicted Tertiary Structure


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TM-score=0.583 to 1tv8A SCOP code=c.1.28.3	TM-score=0.587 to 1tv8A SCOP code=c.1.28.3	TM-score=0.599 to 1tv8A SCOP code=c.1.28.3	TM-score=0.560 to 1wueA SCOP code=c.1.11.2	TM-score=0.478 to 1vc1A SCOP code=c.13.2.1