Template-based Modeling Results for YGCH_ECOLI

Submitted Primary Sequence

>Length 199
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
CCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECHHHHCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEECC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
4200102123221210220010012001433322210000012222331000000023222222102102033122302211101010100002213333422323232332213222322011002422222010110101223222123322201001000200010110310020023000303010000000024
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
1	MUSTER	1wj9A	0.311	0.889	3.137	threading_1	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEEGRRLLWRLEPARGLEPPVVLVQTLTEPDWSVLAQVFPPKPFHPALKPGQRLRFRLRANPAKRLKT--------------------PAEKVAWLERRLEEGG-FRLLEGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
2	SPARKS	1wj9a	0.305	0.889	4.614	threading_2	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEEGRRLLWRLEPARGLEPPVVLVQTLTEPDWSVLDQVFPPKPFHPALKPGQRLRFRLRANPAKRLK--------------------TPAEKVAWLERRLEEGGFRL-LEGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
3	PROSPECT2	1wj9A	0.305	0.889	3.026	threading_3	MWLTKLVLNRRDLANPYEMHRTLSKAVSRLEEGRERLLWRLEPARGLEPPVVLVQTLTEPDDEGYAQVFPPKPFHPALKPGQRLRFRLRANPAKRLKT--------------------PAEKVAWLERRLEEGG-FRLLEGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
4	PPA-I	1wj9A	0.299	0.889	6.229	threading_4	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEVFPPKPFHPALKPGQRLRFRLRANPAKRLK--------------------TPAEKVAWLERRLEEGGFRLL-EGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
5	HHPRED-l	3qrp_A	0.296	0.935	8.788	threading_5	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDYA-QVFPPKPFLKPGQRLRFRLRANPAKRLAA-----------TGKRVALKTPAEKVAWLERRLEEGGFRLLEVQLFLEVRRKKDGGKLLQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
6	HHPRED-g	3qrp_A	0.294	0.940	7.833	threading_6	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGAQVFPPKPALKPGQRLRFRLRANPAKRLAA-----------TGKRVALKTPAEKVAWLERRLEEGGFRLLEVQLFLEVRRKKDGGKLLQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
7	SP3	1wj9a	0.305	0.889	4.869	threading_7	MWLTKLVLNRRDLANPYEMHRTLSKAVSRALEEGRRLLWRLEPARGLEPPVVLVQTLTEPDWSVLDQVFPPKPFHPALKPGQRLRFRLRANPAKRLK--------------------TPAEKVAWLERRLEEGGFRL-LEGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
8	SAM-T99	1wj9A	0.301	0.869	4.701	threading_8	MWLTKLVLNPRDLANPYEMHRTLSKAVSRALEEGRRLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYPPKPFHPALKPGQRLRFRLRANPAKRL--------------------KTPAEKVAWLERRLEEGGFRLLEPWVQILQDTFLEQ-----VQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
9	MUSTER	1wj9A2	0.382	0.513	1.666	threading_9	--------------------------------------------------------------------------HPALKPGQRLRFRLRANPA-------KRLK-------------TPAEKVAWLERRLEEGGFRL--EGERGPWVQILQDTFLEQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP-
10	SPARKS	3pkma	0.151	0.935	0.867	threading_10	IRLVAFKVP---YNHQYYLQGLIYNAIKSSNPKLATYL------HEVKGPKLFTYSLFMAEKREHPYFLGYKKLVNGLLMNPEVRLRFYLHEIKVLREPKKFNGIAVTVVYDVPPMEKYSIIKDDLQDKYKPPSEFEMEVLIAKPKRFRIKPGIYQTAWHLVFRAYG---NDDLLKVGYEVGFGEKNSLGFGMVKVEG-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.881 to 1wj9A SCOP code=d.58.53.1	TM-score=0.877 to 1wj9A SCOP code=d.58.53.1	TM-score=0.887 to 1wj9A SCOP code=d.58.53.1	TM-score=0.877 to 1wj9A SCOP code=d.58.53.1	TM-score=0.875 to 1wj9A SCOP code=d.58.53.1