Template-based Modeling Results for YGFA_ECOLI

Submitted Primary Sequence

>Length 182
MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW
CHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEECCCCCCHHHHHHHCCCCCCEEEEEEEHHEECCCCCCCHHCCCCCEEEECCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW
32331242123311330022002101211212212100000113221102100110131222000000122321100001112323122231202213221332122122100000000012211101201000010032033330210000010110430112311030000002210023
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW
1	MUSTER	2jcbA	0.275	0.978	3.445	threading_1	QIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGKRVVVPKCNK-ETRTMSFRQISNFDQLETVYMNLREPIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHY---KGKTLSLAYSFQMVEHIPVEPFDKNVEKIITEKGTMVK
2	SPARKS	1soua	0.283	0.951	4.297	threading_2	KVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLK-EKELILPKVEG---NEISLYRVHSPACLGVGAFGIMEPVEG--ERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVK---GLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRL
3	PROSPECT2	2jcbA	0.287	0.978	3.953	threading_3	QIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGKRVVVPKCNK-ETRTMSFRQISNFDQLETVYMNLREPIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYL---VHYKGKTLSLAYSFQMVEHIPVEPFDKNVEKIITEKGTMVK
4	PPA-I	2jcbA	0.270	0.978	4.028	threading_4	QIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGKRVVVPKCNKE-TRTMSFRQISNFDQLETVYMNLREPIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHYK---GKTLSLAYSFQMVEHIPVEPFDKNVEKIITEKGTMVK
5	HHPRED-l	1ydm_A	0.302	0.929	5.870	threading_5	KTLEALSALSNEDILQKTER-YKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKC----TKK-QFRTYQTDDQLETVYAGLLEPV--KTKEVNPSQIDL-IVPGVCFDVNGFRVGFGGGYYDRYLSEYE---GKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIIS-
6	HHPRED-g	1ydm_A	0.300	0.934	5.063	threading_6	KTLEALSALSNEDILQKTER-YKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKC---T-KK-QFRTYQTDDQLETVYAGLLEPV--KTKEVNPSQIDL-IVPGVCFDVNGFRVGFGGGYYDRYLSEYE---GKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISC
7	SP3	1soua	0.289	0.951	4.549	threading_7	KVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLK-EKELILPKVEG---NEISLYRVHSPACLGVGAFGIMEPVEGER--VNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVK---GLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRL
8	SAM-T99	1souA	0.283	0.951	5.309	threading_8	KVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLKE-KELILPKVEGNE---ISLYRVHSPACLGVGAFGIMEPVEGE--RVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVKGL---KVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRL
9	MUSTER	1ydmB	0.305	0.956	3.312	threading_9	KTLEALSALSNEDILQKTERYKYLFS-LPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHP--DTKKQFRTYQTDDQLETVYAGLLEPVIK-TKEVNPSQIDL-IVPGVCFDVNGFRVGFGGGYYDRYLSEYE---GKTVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISC
10	SPARKS	3hxta	0.221	0.945	4.138	threading_10	ELKQRL--MSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRY-RFQSNHMDMVRIESPELLPKTSWNIPQPGEGREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQHKPYTLALAFKEQICLQVPVN--DMKVDEVLYED-----

Predicted Tertiary Structure


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TM-score=0.820 to 1souA SCOP code=c.124.1.6	TM-score=0.820 to 1sbqA SCOP code=c.124.1.6	TM-score=0.916 to 1souA SCOP code=c.124.1.6	TM-score=0.820 to 1souA SCOP code=c.124.1.6	TM-score=0.819 to 1sbqA SCOP code=c.124.1.6