Template-based Modeling Results for YGFJ_ECOLI

Submitted Primary Sequence

>Length 192
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
CCCEEEEEECCCCCCCCCCCCEECEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCEEECHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
552110000000211223311000202511002000300241022000000230320132113223020011222220100001000011113100000010110212002200313332000000222211000001200220042242220220022032200203123001102013102201321343
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
1	MUSTER	2wawA	0.237	0.990	2.690	threading_1	LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
2	SPARKS	2wawa	0.242	0.990	3.948	threading_2	LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDPEGIVLMLGDQPGITASAVASLIAGRGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
3	PROSPECT2	2wawA	0.232	0.990	3.138	threading_3	LRRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDPTAIVLMLGDQPGITASAVASLIAGRGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
4	PPA-I	2wawA	0.220	0.995	3.006	threading_4	RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELDGLDIVLVDDAGLGS-SSLKSALTWVDPTAIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
5	HHPRED-l	2waw_A	0.229	0.979	2.847	threading_5	RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKVELDG-LDIVLVDDAGLG-SSSLKSALTWVTAEGIVLMLGDQPGITASAVASLIAGGRATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRVRRIRV-DADVPLDVDTWDDYERLLASVVR-
6	HHPRED-g	2waw_A	0.228	0.984	2.966	threading_6	RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEK-VELDGLDIVLVDDAGLG-SSSLKSALTWVTAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRVRRIRV-DADVPLDVDTWDDYERLLASVVRL
7	SP3	2wawa	0.237	0.990	4.014	threading_7	LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
8	SAM-T99	1h4cA	0.149	0.943	2.954	threading_8	MTTITGVVLAGGKARAMGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQA-----SGLKVIEDSLADYGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIVNRAIEPLLLEYAGERRVMVFMRLAGGHAVDFSDKDAFVNVNTPEELARWQ------
9	MUSTER	1h4cA	0.155	0.943	2.588	threading_9	MTTITGVVLAGGKARAMGGDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQA-----SGLKVIEDSLADPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPALVNRAIEPLLLEYLGERRVMVFMRLAGGHAVDFSHKDAFVNVNTPEELARWQ------
10	SPARKS	2yesa	0.212	0.932	3.514	threading_10	-TQITGVVLAAGRSTP----KQLLPYRDTTVLGATLDVARQAFDQLILTLGGAASAVRAAM-ALDGTDVVVVE----DCAASLRVALARVHPRGIVLMLGDQPQVAPATLRRIIDGPATEIMVCRYADGVGHPFWFSRTVFGELARLHGDKGVWKLVHSGRHPVRELAVDGVPLDVDTWDDYRRLLESV---

Predicted Tertiary Structure


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TM-score=0.780 to 1i52A SCOP code=c.68.1.13	TM-score=0.784 to 1i52A SCOP code=c.68.1.13	TM-score=0.779 to 1i52A SCOP code=c.68.1.13	TM-score=0.782 to 1i52A SCOP code=c.68.1.13	TM-score=0.782 to 1vpaA SCOP code=c.68.1.13