Template-based Modeling Results for YGGR_ECOLI


  Submitted Primary Sequence

>Length 326
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL
CCHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCEECCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL
45032001200433000000102110101021202213132310130024102331221034213000002033112000000223412100000022301303202012102200413300000000212110000000001013223110000211010112232000122311221220010011002311100000102113002000100210000000011210020022002101231231011100100210001200224341100001001113200200331223102201210232111201200122123244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL
1MUSTER3jvvA0.4600.9883.917threading_1MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRIPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIK----KRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGSRENARE
2SPARKS2ewva0.4190.9826.732threading_2LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLM------QMQTMNQTLYKLYKQGLI
3PROSPECT23jvvA0.4600.9885.809threading_3MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIK----KRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGSRENARE
4PPA-I3jvvA0.4600.9889.634threading_4MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRIPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIK----KRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGSRENARE
5HHPRED-l2ewv_A0.4230.9795.663threading_5LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLKLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLMQ------MQTMNQTLYKLYKQGL-
6HHPRED-g2ewv_A0.4220.9825.908threading_6LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLMQ------MQTMNQTLYKLYKQGLI
7SP32ewva0.4190.9826.126threading_7LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLM------QMQTMNQTLYKLYKQGLI
8SAM-T993jvvA0.4570.9888.105threading_8MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKK----RVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGSRENARE
9MUSTER2gszA0.4090.9603.309threading_9LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLRLTPEDTQKLAYSVS-EKHRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCH-RKGLILVTGPTGSGKSTTIASIDYINQ-TKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGE-RDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSLQ---------QTNQTLYKLYKQGLI
10SPARKS1p9ra0.3270.9394.992threading_10IKLINALGEAIKEGASDIHIETFLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVAKLDIAEKRVPQDGRISLAV--DVRVSTPSSHGERVVRLLDKNATRLDLHSLGTADNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNS-SERNILTVEDPIEFDIDG----IGQTQVNPRVDTFARGLRAILRQDPD-VVVGEIRDLETAQIAVQASLTGH-LVSTLHTNTAVGAVTRLRDGIE-------PFLISSSLLGVLAQRLVRTLCPGRTGIHELLLVDDALQELIHSEAGEQAEKHIRA----TTPSIRDDGLDKVRQGIT

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.726 to 1p9wA
SCOP code=c.37.1.11
TM-score=0.727 to 1p9wA
SCOP code=c.37.1.11
TM-score=0.724 to 1p9wA
SCOP code=c.37.1.11
TM-score=0.726 to 1p9wA
SCOP code=c.37.1.11
TM-score=0.726 to 1p9wA
SCOP code=c.37.1.11