Template-based Modeling Results for PLSY_ECOLI


  Submitted Primary Sequence

>Length 205
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
2200000000000001000000000100122102211121100110011001000000000100100000000110001200000000000000000000113102000000000000001000000000000000000000000000000000000010100000000000000200310120134332323232344444448
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
1SPARKS2bkub0.0790.9851.006threading_1NAAAQLIAAIADIELPHGAWPELMKIMVDNTG---AEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAEDIEVQAAAFGCLCKIMSKYYTMKPYMEQALYALTIATMKNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKD
2PROSPECT21pw4A20.0710.8931.232threading_2LPNKLLWYIAIANVFVYLLRYGILDWSPTY--LKEVKHFALDKSSWA------YFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI--ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHATAAGFTGLFGYLGGSVAASAIVGYTVDFMIGGSILAVILLIVVMIGEKRRH------------EQLLQELVP
3PPA-I1pw4A20.1080.8101.036threading_3FALDKSSWAYFLYEYAGIPGTLLCGWMS----DKVFRGN----------------RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIG-FLIYGP------VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------------
4PROSPECT23ibvA10.1221.0001.212threading_4MSAQDVENAVEAALDPSVGPIIFIGSLRSSSTCHEIFSEKTKYKPSTRLICLQTLSEKVELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNWNDFFASLQGVIAASSQSEFSNFYLKVLLSIGAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVNEPCMNLLYSFLQIEVNKKMKPLEKLNSK
5PROSPECT21oyzA0.0931.0001.183threading_5NSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIQIKICKKCEDNVFNILNRATAIESTAQIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELDIIEAAGELGDKTLLPVLDTLYKFDDNEIITSAIDKKRS
6PROSPECT22qk2A0.0780.9411.177threading_6TLRKESLEVLEKLLTDHYGALVALKKVITKDSNVVLVAAGKCLALLAKGLAKR------FSNYASACVPSLLEKFKEKKPNVVTALREAIDA------IYASTSLEAQQESIVESLSNKNPSVKSETALFIARALTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKDKAVTPLLADVDPLKAKQEKAEIKIKVA
7PROSPECT22of3A0.0710.9611.143threading_7APTDEHISQLQTLLGNQAKVSLM--SQLFHKDFKQLRFFETNPAALIKVLELCKVIVELIRDEVSAFVPYLLLKTGEAKDNMRTSVRDIVNV------LSDVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEDQMWKAAGRMADKDKSLVEERIKRTGV
8MUSTER3orgA0.1580.9560.785threading_8SRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGS---GLPQMKSILGFYDKMALELRVLFAKALGLICAIGGGLP-WEGPNVHIACIIAHQFYRLGVFKELCAAACAVGLASSFGAPLGGVLYSIETIAVQAFWKGVLSALSGAIVYELDVSRTQTLLYAILGALMGVLGALFIRCVRSIY-----ELRMRHYPGTNRYFL
9SPARKS3zxpa0.0650.9710.909threading_9QQDAVFELISMGFNVALW-YTKYASRLAGKENITED-----EAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLERLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLF
10PROSPECT21r2fA0.1100.9761.125threading_10IQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHE---EAVLSNISFMEAVHARSYSSIFSTLCQRKAQIILAHYVSDEPLKKKIASVFLESFLFLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALIEREELKLFALDLLMELYDNEIRYTEALYVNDVKAFLCYNANKALMNL--GYEALFPPEMADVLAALSP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.810 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.705 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.790 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.755 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.705 to 1wa5C
SCOP code=a.118.1.1