Template-based Modeling Results for YHGE_ECOLI


  Submitted Primary Sequence

>Length 574
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
5542311221100000000000000000001000332100000000000000000120121323211000000000000000113131311211202210010000000000100110132122323212021001000210011101111201122111101300300102001100121310000000000000000020023002001300010031011100000001212121201110032110000000000000000101222342222110001000100000010000000000001023110023100000000010010000000102432311210103001000000000000010110111100011100212233221331101002201320220021033222224223102101201323332333223310122121022223122200110131223122013420000000003222321100011332100000012444201000001123322232012003313121324112100021120223245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
1SPARKS2xwub0.1300.9231.032threading_1LDQVEHW------QSFLALVNMIMFCTGIPGHYPVNETT----SSLTLTFWYTLQDDILSFEKQAVYQQVYRPVYFQLVDVLLHKGFWSSDEKEQFRIYRVDISDTLMYVYEMLAELLSDKLGRLLTSYSWQHTEALLYGFQSIANYSDVVPGLIGLIVQLADTVMFTIGA--LSEWLADHPVMINSVLPLVLHA-LGNPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQ--------DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNPYIQQLEKLAPNPSNKLAIVHILGLLSNLFTTLDISHPVVVVLQQVFQLIQKVLSKAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLL---VTSVTLTLFQQGPR--DHPDIVDSFMQLLAQALKLCERLDVKAVFQCAVLALKFPEAPCGFFTELLPRCGEVES---------VGKVVQEDGRMIAVLEAIGGQFALNKHCFSLLSMWEALQPPGFPSALSPEQKDTFSQQLRERVNKRRVKEMVKEG---------
2PROSPECT21w63A0.0800.8892.148threading_2MPAPIRLRELIRTIEEREMIQKECAAIRSSFREEDNTY-------RCRNVAKLLYMHMLGYPAHFGQLECLKLIA---------------SQKFTDKRIGYLGAMLLQDVHLLMTNCIKNDLNHSTQ--FVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRST---IVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMDCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSAVPNLIQLITNSVEMHAYQRLYKAILGDYSQQPLVQVDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTA----------------------------------IMKLSTRFTCTVNRIKKVVSIYGSSIKYDHMRSALLERMP---VMEK
3PPA-I3zuxA0.0920.5301.223threading_3-----NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDDILFKHPKVVIIGVIAQFAIM-----PATAWCLSKLLLPAEIAVGVILVGCCP-----------GGTASNVMTYLANVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGML---MSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAS---KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTG-------LPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4PROSPECT21b3ua0.1080.8712.121threading_4AAADGIALALGVERTRSELLPFLTDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAIS----------HEHSPSDLEAHFVPLVKRLAFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLEDLEALVMPTLRQAAYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCE-----NLSADCRENVIMSQILPCIKELVQHVKSALASVIMGLSPILG--KDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLLGVEFFDEKLNSLCMAHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYCGQDITTKHMMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDV-----------------------------------KYFAQEALTVLS----------------------LA
5PPA-I3g61A40.1080.5641.124threading_5--GWKLTLVILAISPVLGLSAGIWAKILSSFTDK-----------ELHAYAKAGAVAEEVLGQKKELERYNNNLEEAKRLGIKKAITA-----NISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGE--ILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA---------TGSRLAVIFQNIANLGTGIIISLIYF---------------ENVLLVFSAIVFGAMAVGQVSSFAPDY--------AKATVSASHIIRIIEKTPEIDSY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6PROSPECT21jdha0.1010.8242.111threading_6AVVNLIRAIPELTKLLNQVVVNKAAVMVHQLSKKEAS------RHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNL----------SHHREGLLAIFKSGGIPALVKML--------------GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL--------LNKTNVKFLAITTDCLQILAYGNQESKLIILAGPQALVNIMRTYYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLINVVTCAAGILSNLYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL----CPANHAPLREQGPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLYSPIENIQRVAAGAQDKEAAEAIEAEGATAPLTELLHSRNEGV-----------------------------------ATYAAAVLFR------------------------MS
7PPA-I2ooeA0.0960.7261.105threading_7KGKLPMAQAYDFALDKIGSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEG--------------INIHLAKKMIEDMNARRVAKEYETVMKGLDRNAPSVPPQPQEAQQVDMWKKYIQWEKSEDQTLITKRVMFAYEQCLLVLGHH--PDIWYEAAQYLEQSSKLLAEKGD--MNNAKLFSDEAANIYERAISTLLKKNMLLYFAYA--------DYEESRMKYEKVHSIYNRLLAI-------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFEL----GLKKYGDIPEYVLAYIDYLSHLNE------DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNI-----------GDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSASELKALGYKDV-------------------------------------------------------------------------------------------------
8PROSPECT21qgra0.1030.9982.103threading_8MENPGNSQVARVAAGASQCVAGIACAELVANVTNPNSTEHMKESTLEAILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRLQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTCKAAGVCLMLLATCCEDDIVPHV-LPFIKEHIKNPDWRYRDAAVMAFGCPSQLKPLVIQAMPTLIELMVVRDTAAWTVGRICELLPEAAINDVYLAPLLQSAEPRVASNVCWAFSSLAEAAYEAADVADDQEELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHAFGKDVLKLVEARPMIKLKNQA
9PPA-I3g61A10.0910.5381.052threading_9----------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVAL-----PLMMLIFGDMTDSFASVGNVSKNS------TNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIKFFHAIMNQEIGWFDVVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKSLTREQKFETMYAQSLQIPYRNAMKKAHV-------FGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10PROSPECT22bkuB0.0840.9742.055threading_10MSTAEFAQLLENSILSNDNFLQFAGLSSQVLIDENTK--------LEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNLTALVSIEPRIANAAAQLIAAIADIELPLMKIMVDNTGAEQPENVKRASLLALGYLIAIVQGAQSTETSKAVRLAALNALADSLIMQVVCEATQAEDIQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYEQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNGPDKVQRTYYVETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLTIINLVEQLAEATPSPIYNFYALVDGLIGAANRIDNEFNARASTSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSKSPSSVEPVADMLMGLFFRLLEKKDSAFEKYLETFSPYLLKALNQVDSPVSVLAQMISNPNARRELLCVAAQNT-------KPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKMFPDGSIKQFYGQDWVRTRSGQ

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.625 to 1kpkA
SCOP code=f.20.1.1
TM-score=0.590 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.751 to 1w63C
SCOP code=i.23.1.1
TM-score=0.389 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.370 to 1xfdA
SCOP code=b.70.3.1