Template-based Modeling Results for YHHT_ECOLI


  Submitted Primary Sequence

>Length 349
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
5533323421010001000000000002000300010000000000010001102422232111110100001101111111102103201310130141013101201300321313002320142011310120011001000100010000000000000203201210221132131111002200300120000100100000000000011010210000000000011001000000000000000112111100000000000110201002021113311001000000100002001000000000000001000221320120000002333424235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMETPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
1SPARKS2xwub0.0960.9801.178threading_1ISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVMETSHGICRIAVALGEN-HSRALLDQ-VEHWQSFLALVNMIMFCSSLTLTFWYTLQDDILEKQAVYQQVYRPVYFQLVDVLLHK-AQFPSDEEYGFWSFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLTIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGN--PELSVSSVSTLKKICRECKYDLAANIVAVSQDVLMKQIHKTSQC-MWL-MQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEIPNPSNKLLSNLFTTLDISHPNPV
2PROSPECT21ejlI0.1260.9971.787threading_2GTVNWSNSNNLESQLQATQAARKLLLIPKFVSFLIQFESAWALTVVDGGAIPAFISLLASPHAHISEQAVWALGNIFRDLVIKHGAIDPLLALLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI-LPTLVRLLPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSTKIIQVILDAISNIFQAAETEKLSIMIEECGGLDKIEALQRHENESEKYFS
3PPA-I3zuxA0.1050.8221.237threading_3-----------NILSKISSFIGKTFSLWAALFAAAAFFIPWLLGIIMFGMGLTLKDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLN------------LPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAMESGLLIFAVVVLHNG------IGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVV-----AVPGALFSVWHNISGSLLATYWAAKA----------------------------
4PROSPECT21jdha0.1031.0001.725threading_4LNDEKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLPAIVEAGGMQALGCLWTLRMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVS
5PPA-I1t33A0.0710.6071.120threading_5---------------------------------------------------------------------------------------------MTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHA--EKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDT----VNLSKFISREQLSPTSAYQLVHEQVIDP-------LHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ-------------------------------
6PROSPECT21ee4a0.1030.9971.686threading_6QENSDDMQEQLSATVKFRQILLQLEAAWALTNIASAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQA-LPTLAKLITETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADCQQNENDKIYEKA
7PPA-I3g61A10.0910.6281.084threading_7----------------------------------------------------------------------------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCQIHKIRQKFFHAIMGWFDVHDVGELNTRLTDDVSK---INEGIGDKIGMFFQAMAT--FFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEV-------FKIIDNKPSIDSFSGW
8PROSPECT23a6pA10.0870.9601.654threading_8MMDPNSTCPICVPCGLRLAAIVRHFGLQILEHVVKFRWNGMEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKRMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRR-------RDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQAN-------CRVGVAALNTLAGYIMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDMTNLVKMGFPSKTDSP
9PPA-I3kkdC0.0450.5671.074threading_9------------------------------------------------------------------------------------------------GSEQRRQAILDAARLIVRDGVRVRHRAVAAEVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQR-------ILSLGAVHFFQVLGSGQPEQDAKVLTSIILQEYQGLVDGVEQLAVDERAILRRYLNLVGL------------------------------------------------
10PROSPECT21w63A0.0920.9941.612threading_10MPAPEDNTYRCRNVAKLLYMHVQGLALCTLGCMGSSEMCRDLAGEVMEMFLPATKNLLNEKNHGVLHTSVVLLTEMPDMLAHFRKLVPQLVRILPFLQVRILRLLRILAQVATNTETSKNVLTIMDIKSESGLRVLAINILLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMGNNIRGMMKELLYFLDSCEPEFKADCASGIFKRWHIDTIMRVLTTAGSYAVPNLIQLITNSVEM--HAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVYDHERMPVMEK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.428 to 2j0oA
SCOP code=a.250.1.1
TM-score=0.605 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.868 to 1ialA
SCOP code=a.118.1.1
TM-score=0.402 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.403 to 1jqnA
SCOP code=c.1.12.3