Template-based Modeling Results for YHHZ_ECOLI

Submitted Primary Sequence

>Length 392
MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECEEEEEECCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEEEECCEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHCCCHHCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK
53120001010233121221002232212323221321010000113022222112001010012023001100200132220200010011252231120010202100001021312333222110001011010200112130001023312221112224332323121100200010011000121203001200240122012002201233210000000101113223131122032111313222211320101102113322310230142123212320013013123021303230011133130122010013000231011212000002222223111301231131022130220111012010111132224338
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK
1	MUSTER	3he1A	0.252	0.365	1.013	threading_1	-ATPAYSITG-TKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIP---RVHKPVVITKVFDKASPLLLAALTSGELTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDY---HFTHLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	2x9wA	0.065	0.941	1.445	threading_2	EAKPKIDKDFKGKANPDTPRVDKDTPVNHQVALANYATANWSDRTEGLAFNKGTVKVTDYALTEVATKLTDAGLAKVNDQNAEKTVKITYSATLNDKAIVEVPE-SNDVTFNYGNNPDHGNTPKPNTLTKTWVDFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTE-----------------YKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDAL--DRAVAAYNALTAQQQ--TQQEKEKVDVIAANNAFEWVADKDNENVVKSDAQGRFEITPAGYALLTSRQKFEVTATSYSATGQGIEYTAGSGKD-DATKVVNKKIT
3	SPARKS	3he1a	0.259	0.365	3.239	threading_3	-ATP-AYSITGTKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIPRV---HKPVVITKVFDKASPLLLAALTSGELTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYHFT---HLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	3he1A	0.273	0.365	1.794	threading_4	-ATPAYS-ITGTKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIPR---VHKPVVITKVFDKASPLLLAALTSGERLTVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKD---YHFTHLEDVHFTYRKITWTHEVSGTSGSDDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RS
5	PPA-I	3he1A	0.259	0.365	3.265	threading_5	-ATPAYSITG-TKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIPR---VHKPVVITKVFDKASPLLLAALTSGERLKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYHF---THLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-l	3he1_A	0.283	0.352	6.984	threading_6	-ATPAY-SITGTKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVII------VHPVVITKVFDKASPLLLAALTSGERLKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDY---HFTHLEDVHFTYRKITWTHEVSGTSGDWRS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	3he1_A	0.273	0.365	5.881	threading_7	-ATPAY-SITGTKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIPR---VHKPVVITKVFDKASPLLLAALTSGERLKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDY---HFTHLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SP3	3he1a	0.259	0.365	3.166	threading_8	-ATP-AYSITGTKQGLITAGAFTEDSVGNTYQEGHEDQV-VQGFNHEVIIPRV---HKPVVITKVFDKASPLLLAALTSGELTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIK---DYHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SAM-T99	3he1A	0.275	0.352	6.665	threading_9	-------SITGTKQGLITAGAFTEDSVGNTYQEGHEDQVV-QGFNHEVII---PRVHKPVVITKVFDKASPLLLAALTSGERLKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYHF---THLEDVHFTYRKITWTHEVSGTSGSDDWRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	MUSTER	3v4hA	0.154	0.332	0.738	threading_10	---DMFIKIDG-----IE---------GESLDANHKNEIQVLAWNWDVAQH--KASVSDFCFAHYIDKASPNLLSYCLLGKHIKNVQFVLRKP-----LEYLTIKFTDVIITRVDMAGSLEDRPREEIRFSFTKMTQDYVMQNAKSGVI---ANYDV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.516 to 1y12C SCOP code=b.157.1.1	TM-score=0.387 to 2vo8A SCOP code=b.2.2.2	TM-score=0.516 to 1y12C SCOP code=b.157.1.1	TM-score=0.500 to 1y12C SCOP code=b.157.1.1	TM-score=0.393 to 1wruA SCOP code=b.106.1.1